Clostridium acetobutylicum ATCC 824: CA_C2947
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Entry
CA_C2947 CDS
T00056
Symbol
topB
Name
(GenBank) Topoisomerase B
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cac
Clostridium acetobutylicum ATCC 824
Brite
KEGG Orthology (KO) [BR:
cac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cac03032
]
CA_C2947 (topB)
Enzymes [BR:
cac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CA_C2947 (topB)
DNA replication proteins [BR:
cac03032
]
Prokaryotic type
DNA Topoisomerases
CA_C2947 (topB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Cas12f1-like_TNB
Zn_ribbon_Top1
DNA_ligase_ZBD
Zn_ribbon_LysW
Zn_ribbon_ISL3
Zn_ribbon_TiaS
Zn_ribbon_6
Zn_ribbon_TFIIB
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AAK80889
UniProt:
Q97F08
LinkDB
All DBs
Position
complement(3079332..3081518)
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AA seq
728 aa
AA seq
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MGKILVLAEKPSVARDLAKVLKANINKKTHLEGNKYVVIWALGHLVSLADPESYGEKYKK
WSMDTLPMLPKNMKLSVLKNTSKHFYDIKKVMERKDLDELVIATDAGREGELVARWIIEM
AKWKKPIKRLWISSQTDRAVRDGFAHLRDGRDYENLYKSAKCRSEADWFVGLNVTRALTC
KYNAQLSAGRVQTPTLYMIVSREEEIRKFKPKDYYTIEGKVKSFSMNWHDKSGDFKIFNK
ERAEKIEALVKGSKGKIVDVSESKKKKYSPALYDLTELQRDANRFFGFSAKETLSIMQRL
YENHKLLTYPRTDSRYIPHDVVATLPDRLRAISIGKYSKFAAEILRSKINVHKGFVDDSK
VTDHYAIIPTEERPALGALSNEEFKIYDLVVKRFLSIMLPPFEYIQTTVKAEVAGEIFIA
KGKVVKSKGWKEVYDKTEDFEEKSELKDQMLPEMNKGEDITFSTVSIKKGQTKPPSRFTE
ATLLSAMENPQRYVSMDKISAKTLGETGGLGTVATRADIIEKLYKTFYIEKKGNEIVPTS
KGKQLVNLVPSDLKSPLLTAKWEGQLDAISKGKLNGVSFVNEIKGYASKLVDDVKGSKDT
FKYDNLTGTKCPECGKYMLQVNGKKGRMLVCQDRECGHRENLAMFTNVRCPECHKKLELR
GEGEGRIYVCPNCSFREKYSSFQKRFKGNNNKVNKREVSNYMKKMKKEAEAPINNAFADL
MSMFKDKN
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaatacttgttttagctgaaaaacccagtgttgcaagagatcttgccaaagtg
ttaaaagcaaatattaataagaaaactcatttagaaggaaataaatatgtagtaatttgg
gcattagggcacttggtttcattagctgaccctgaaagctacggtgaaaagtataaaaaa
tggagtatggatacacttcctatgcttcctaagaatatgaagttaagtgttttgaaaaat
acatcaaagcatttctatgatataaaaaaggttatggaaagaaaggatttagacgaactt
gtaatagcaacagatgctggacgtgaaggtgagcttgttgcaagatggataattgaaatg
gcaaagtggaaaaagccaataaagcgtctttggatatcctcacaaactgatagggccgta
agagatggatttgcacatttaagagatggccgtgattacgaaaatttatataaatctgca
aagtgcagatcagaagcagattggtttgttggacttaatgttacacgtgcactaacttgc
aaatataatgcacagctatcagctggtagagttcaaacacctacgctctatatgattgtt
tcaagagaagaagagataagaaaatttaaaccaaaggactattatactatagagggaaag
gtaaaaagcttctccatgaattggcacgataaatctggagattttaaaatatttaacaaa
gagagagctgaaaagatagaagctctagttaaaggcagcaaaggaaaaattgtagatgtt
agtgaaagtaaaaagaaaaaatattctccagcattatacgatttaactgaacttcaaaga
gatgcaaatagattctttggattttcagcaaaagaaactttatcaataatgcagagactt
tacgaaaatcataagcttttaacttatccaagaacggattcaagatatattcctcatgat
gttgtagcaactcttccagatagattgagagctatttccataggaaagtattcaaaattt
gcagcagaaatattaagaagtaaaataaatgttcacaaaggctttgtggatgattctaag
gtaacggatcactatgctataattccaacagaagaaagaccagcgcttggggctttaagc
aatgaagaatttaaaatatatgatttagttgttaaaagatttttaagtataatgcttcct
ccttttgaatatattcaaactacagtgaaggcagaggtagccggagagatatttatagca
aaaggaaaggttgtaaaatccaaaggttggaaagaagtttacgacaaaactgaagatttt
gaagagaagagtgaattaaaagatcaaatgcttcctgaaatgaataaaggagaagatata
accttcagtacagtttctattaaaaaagggcaaactaaaccaccttcaagatttacagaa
gcaacacttttgtcagcaatggagaaccctcaaagatatgttagcatggataaaatttct
gcaaaaacacttggagagacaggtgggcttggaactgttgctacaagggcagatataata
gaaaagctttataagactttttatatagagaaaaaaggaaatgaaatagttccgacatca
aagggaaaacaactagttaatttagtaccttctgatttaaagtcacctcttttaacggca
aaatgggaaggacagcttgatgctataagcaagggaaaattaaatggagtaagttttgtt
aatgaaataaaaggatatgcttctaagcttgtagatgatgtaaaaggaagtaaggacact
tttaaatatgataatttaactggaacaaagtgtccagagtgcggaaaatatatgcttcag
gtgaatggtaagaagggtagaatgcttgtatgccaggatagagagtgcggacatagagag
aatttagctatgttcacaaatgtaagatgtcctgaatgtcataaaaaacttgaacttaga
ggagaaggagagggcagaatatacgtgtgcccaaactgcagctttagagaaaagtattct
tctttccaaaaaaggtttaagggtaataataataaagttaataaaagagaagtttcaaat
tatatgaagaagatgaaaaaggaagcagaagcaccaattaataatgcctttgcagatctt
atgtcgatgtttaaagataaaaattag
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