Clostridium acetobutylicum ATCC 824: CA_C3088
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Entry
CA_C3088 CDS
T00056
Name
(GenBank) NtrC family transcriptional regulator, ATPase domain fused to two PAS domains
Organism
cac
Clostridium acetobutylicum ATCC 824
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
PAS_9
PAS_8
PTS-HPr
PAS_4
HTH_50
PAS_10
AAA_5
AAA
AAA_2
PAS_GdpP
Mg_chelatase
HTH_8
CCDC85
Parvo_NS1
Sec8_N
ZapG-like
Motif
Other DBs
NCBI-ProteinID:
AAK81028
UniProt:
Q97EM2
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Position
3241502..3243505
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AA seq
667 aa
AA seq
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MFKNCITVNIKNGVHTRIAAMIVHEASKLKEKYGINLYVKQMNAKEPIAISMLALLSLKI
KENELVEISCFEDTTNGQRAVIELSNYITKSLGENIKSFSNIDAIIEESTLVNENVLENI
PMGIIVVDINCNITSINDYALNIMDKNIESVIGMPVLDIIPTSDTPLVIKTKEKKLGKTQ
HINKHIVISNCCPIISNNNVIGALCVFQDISELVGIKELNERFQKILETSHDLICFIDEN
RKISYINPTYEKCLNIKSEDVLGKDLMKISPDGYRMKVFNSKKPIENVVYTKNNVGIICT
VVPIFIGETFKGVISISKEADEIIKMAKELEKSEEELNYYKDELKRHNKLSASFNNIIGN
SSSLRDVLITADKAADSTSTVLIRGESGTGKELIAKAIHNGSPRKDKPFVRVNCAAIPEN
LIESELFGYEKGAFTGAVKSKPGKFAIANTGTIFLDEIGDIPKSMQVKLLRVLQEREFES
VGGIETQKVDVRIIAATNRNLEEMLKTGEFREDLYYRLNVLSIFLPPLRKRKEDINLLVE
HFINNISKKLNKPVKKIEESCLSCFMNYNWPGNIRELENIIERSINMCDDGVIMLKDLPF
YITNIAPQNDIVKIDDNSPLLKLEDYEKIILTIAMKKYKSYNKVGKILGITHRTVSLKCK
KYNIDVQ
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaattgtattacagtaaatattaaaaacggagttcacactagaattgcagca
atgatagttcacgaagcatctaagcttaaagaaaaatacggtattaatttatatgtaaag
caaatgaacgctaaagaaccaattgcaataagtatgctggcactactttctcttaaaatc
aaagaaaatgaacttgtagaaatttcctgcttcgaagatactacaaatggtcaaagggct
gttatagagttgagtaattatataactaaaagcctcggtgagaatattaagtctttttca
aatatagatgcaataattgaagaaagtacattagtcaatgaaaatgtacttgaaaacata
cctatgggtattatagtggtagacataaattgcaatataacttctataaatgactacgct
cttaacattatggataaaaacattgaaagtgttattggtatgccagtattagatattatt
ccaacttcagatactcctcttgttataaaaactaaagagaaaaagctaggaaaaactcaa
cacataaacaaacatatagtaatatctaactgctgccctataatctcaaacaataatgtt
attggcgctttatgtgtatttcaagatatttcagagctggtaggcataaaagagcttaac
gaacgctttcaaaaaatactagaaacttcccatgatctaatatgttttatcgacgaaaac
agaaaaatctcttacataaatccaacttacgaaaaatgccttaacattaaatcagaggat
gtacttggaaaagaccttatgaaaatttcacctgatggatatagaatgaaagtcttcaac
tcaaaaaagcctattgaaaatgtagtctatactaaaaataatgtaggtatcatatgtaca
gttgtgccaatttttataggagaaaccttcaaaggtgtaatctcaatttctaaagaagca
gatgagattataaaaatggcaaaagagcttgaaaaatcagaggaagaacttaattactat
aaggatgagcttaaaagacacaataagcttagtgcttcctttaataatataataggcaac
agcagctctcttagagatgttcttataacagctgataaggcagcagattcaacttctaca
gttttgataagaggcgaaagtggtactggtaaagaacttatcgcaaaagctattcataat
ggaagcccaagaaaggacaagccatttgtaagagttaactgtgctgcaatacctgaaaat
ttaatagaaagtgaactttttggctatgaaaaaggtgcctttacaggtgctgttaagtct
aaacctggaaaattcgctatagcaaatacaggaacaatatttctcgatgaaattggtgat
atacctaaatcaatgcaggttaaacttcttagagtacttcaagaacgagaatttgaaagc
gttggtggtattgaaacccaaaaggtagatgttagaattatagccgcaactaacagaaac
cttgaagaaatgcttaaaactggtgagtttagggaagatttatactatagattaaacgta
ctttccatatttcttccccctctaaggaaaagaaaagaagatataaatcttttagttgag
cactttataaataacataagtaaaaaactcaataaaccggtaaagaaaattgaagaaagt
tgtctttcatgttttatgaattataactggccgggaaatataagagaacttgaaaatatt
atagaaagatctataaacatgtgcgacgatggagtaataatgttgaaggacctaccattt
tatataacaaatattgctcctcaaaacgacattgtaaagattgatgataatagtccactt
ttaaaattagaagactatgaaaaaataattttaactatcgctatgaaaaaatataaaagc
tacaataaggttggaaaaattctaggaataactcatagaactgtatctttaaaatgtaaa
aagtataatatagatgttcaatag
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