Clostridium acetobutylicum ATCC 824: CA_C3104
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Entry
CA_C3104 CDS
T00056
Symbol
rpoA
Name
(GenBank) DNA-dependent RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cac
Clostridium acetobutylicum ATCC 824
Pathway
cac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CA_C3104 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cac03021
]
CA_C3104 (rpoA)
03400 DNA repair and recombination proteins [BR:
cac03400
]
CA_C3104 (rpoA)
Enzymes [BR:
cac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CA_C3104 (rpoA)
Transcription machinery [BR:
cac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CA_C3104 (rpoA)
DNA repair and recombination proteins [BR:
cac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CA_C3104 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
RAD51D_N
PASTA
DUF211
Motif
Other DBs
NCBI-ProteinID:
AAK81044
UniProt:
Q97EK6
LinkDB
All DBs
Position
complement(3254878..3255825)
Genome browser
AA seq
315 aa
AA seq
DB search
MLEIEKPKIECVESTEDGSYGRFVVEPLERGYGITLGNSLRRILLSSLPGVAANSVRIEG
VLHEFSTVKGVKEDVTELILNIKALCLKMEGEDSKVIYIDAHGPGEVTGADIRTDGSVEV
INKDLHIATLDEDGKLYMEIEVNRGRGYVTQNKNKRDDMPIGTIAVDSIYSPIKRVNFTV
ENTRVAQITDYDKLTIEVWGNGTIRPEEAISLAAKILIEHFKLFMTLTDHADDVEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTQRSMEDMMKVRNLGRKSLEEVE
QKLKALGLSLKLNDE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttggaaatagaaaaacctaaaatagaatgtgttgagtctacagaagatggttcttat
ggcaggtttgttgtagaacctcttgaaagaggatatggaattaccctgggcaattcatta
agaagaatacttctttcatctttaccaggagttgccgctaattcagtgagaattgaggga
gtacttcatgagttttcaactgttaaaggagtaaaagaagacgttacagaattgatactt
aacattaaagctttatgcctcaaaatggaaggtgaagattctaaagtaatatatatagat
gcacatggacctggagaggttacaggcgctgatataagaactgatggatctgtagaagtt
atcaataaggatttacatatagcaactctcgatgaagatggaaagctatatatggaaatt
gaagttaacagaggcagaggttatgttactcagaataagaataaaagagatgacatgcct
ataggaacaatagcagttgattcaatatattctccaatcaaaagagtgaatttcactgtt
gaaaatacaagagttgctcaaataactgattacgacaaactcaccatagaagtatgggga
aatggtactataagaccagaagaagcaattagtttggcagcaaagatacttatagagcat
tttaaattatttatgactcttacagatcatgcagatgatgtggagataatggtagaaaaa
gaagaagataagaaggaaaaggttcttgagatgactatcgaagaacttgatctttcagtt
agaagttataattgcttaaagagagcaggaataaacactgttcaagaattaactcaaaga
tccatggaagatatgatgaaagttagaaaccttggaagaaaatctttagaagaagttgaa
cagaaacttaaagctttaggattatcattaaagttaaatgatgaatag
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