Clostridium aceticum: CACET_c01920
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Entry
CACET_c01920 CDS
T03971
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cace
Clostridium aceticum
Pathway
cace03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cace00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CACET_c01920 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cace03021
]
CACET_c01920 (rho)
03019 Messenger RNA biogenesis [BR:
cace03019
]
CACET_c01920 (rho)
Transcription machinery [BR:
cace03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CACET_c01920 (rho)
Messenger RNA biogenesis [BR:
cace03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CACET_c01920 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
AAA_22
SAP
AAA
AAA_25
Mor
NACHT
Motif
Other DBs
NCBI-ProteinID:
AKL93708
UniProt:
A0A0G3W5R4
LinkDB
All DBs
Position
210263..211591
Genome browser
AA seq
442 aa
AA seq
DB search
MDNTELQEMKLSELREEAKKLGIKNFAKYKKAELIDLLIEEKEKNKVIPIDATKGNKTTE
LPQHLSDEIPEGEEMNIAEGILEIHQDGYGFLRRENYLSSDGDIYISPSQIRRFNMRTGD
KISGITRPPKSGEKFKALLYVKNINGLNPESAIQRPNFEDLTPIYPQERINLESDTKELS
TRLIDLIAPIGKGQRGIIVAPPKVGKTILLQKIANSVSINYPQIEIIVLLIDERPEEVTD
MQRSIKGEVVYSTFDELPSHHIKVAEMVLNRAQRLVEHGKDVLILLDSITRLARAYNLTI
PPTGRTLSGGLDPGALHKPKRFFGAARNLEEGGSLTIIATALIETGSRMDDVIFEEFKGT
GNMELHLDRKLSEKRIFPAVDINKSGTRREELLLSQTEMEAIWSIRRAMSSNPVQEVTEK
IVNSLIETKKNNDFVELIRKKI
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
ttggacaatactgagctacaagagatgaagttgtcagagcttcgagaagaagctaaaaag
ctaggaattaaaaattttgcaaaatataaaaaggcggaactaatagacttgttaatagaa
gaaaaggaaaaaaacaaagttattcccatagatgctactaaaggaaataaaacgacagaa
ttacctcagcatctttcagatgaaatccctgagggggaagagatgaacattgcagaaggt
atattagagattcaccaggacggttatggatttttacgaagggaaaattacctctcgagt
gatggtgatatatatatatcgccttcgcaaattagaaggtttaacatgagaacaggagat
aaaatctccggtataacaagacctcctaaaagcggagaaaagtttaaagctcttctttat
gtgaaaaacattaatggattaaatccagaatctgctattcaaagaccaaactttgaagat
cttacccctatttatccccaagaacgaattaatttagaaagcgatacaaaagaattatct
acgcgattaatcgacttaattgcccctattggtaagggacaaagagggattattgtggcc
cctccaaaagtagggaaaaccattttgctacagaaaatcgctaacagcgtttctattaat
tacccgcaaattgagattattgtactattaattgatgaacgacctgaggaagtgacagat
atgcagcgctctattaaaggagaagttgtttattctactttcgatgaacttccaagtcat
catattaaagtagcagagatggtattgaatcgtgcccaaagattagtagaacatggtaag
gacgtattgattttattggatagtatcactaggctggcaagagcctataacctcaccatt
cctcctacaggaagaaccttatcaggagggttagatccaggagctcttcataaacctaaa
agattttttggtgctgctagaaatttggaagaaggaggcagccttacaatcatagctact
gctttgattgaaacaggaagtaggatggacgatgtaatttttgaggaatttaagggtacc
ggcaacatggaacttcacttagatcgtaagttatcagaaaaaagaatatttccggctgtt
gatattaataagtctggcactagaagggaagaattactactaagtcagacggagatggag
gctatttggagtattaggagggctatgagcagcaatcctgtacaagaggtaacggaaaaa
attgtaaactccttgatagaaaccaagaaaaacaacgattttgtagagttaattagaaaa
aagatctaa
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