Clostridium aceticum: CACET_c04870
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Entry
CACET_c04870 CDS
T03971
Symbol
truA1
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cace
Clostridium aceticum
Brite
KEGG Orthology (KO) [BR:
cace00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cace03016
]
CACET_c04870 (truA1)
Enzymes [BR:
cace01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CACET_c04870 (truA1)
Transfer RNA biogenesis [BR:
cace03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CACET_c04870 (truA1)
Prokaryotic type
CACET_c04870 (truA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Hira
Motif
Other DBs
NCBI-ProteinID:
AKL93997
UniProt:
A0A0D8IF41
LinkDB
All DBs
Position
complement(516601..517338)
Genome browser
AA seq
245 aa
AA seq
DB search
MRNIKLIIEYDGSRYSGWQRLKGADETIQGKLEGVLTQMVGSPIEVIGSGRTDAGVHARG
QVANFHTKSDMSLKEIHKYMNYYLPQDIVVKEVKEVSEKFHSRYNVKSKKYVCYIWNHWI
PSAFHRKYSYHLSEKLDIALMQEASEKLLGTHDFIGFSSVKKTNKSTTRTIKEITITKEG
NMVIFSFIGDGFLYNMVRIIMGTLIEIGLKQKKVSYIDEILESKTRSIAGKTLSPQGLFL
EEVYY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatattaaactgataatagaatatgatggtagtagatatagtggctggcaaaga
ctaaaaggtgccgatgaaacaatccaaggaaaattggaaggtgtcctcactcagatggta
ggctcccccatagaggttatcggatcagggcgaactgatgcaggtgttcacgctagaggc
caggtggctaattttcacaccaagtctgatatgtcattaaaagagatccacaaatacatg
aactattatttgccacaagacattgtcgtcaaagaagtaaaagaagtttcagaaaaattt
catagccgctataatgtaaagagcaaaaaatatgtctgctatatttggaatcattggatc
ccatcagcttttcatagaaaatatagttatcaccttagtgaaaaactagatattgcattg
atgcaagaggcatcagaaaaactattaggaacccatgattttattggtttttcttcggtt
aaaaaaaccaacaaatccaccactcggaccattaaagaaataaccattactaaggaagga
aatatggtcatatttagttttattggagatggttttctatacaatatggttcgtattata
atgggtactttaatagaaattggcctgaaacaaaaaaaggtctcctatattgatgaaata
ctagagagcaaaactaggtccattgccggcaaaacactttctcctcagggtttattctta
gaagaagtatattattaa
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