Clostridium aceticum: CACET_c28050
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Entry
CACET_c28050 CDS
T03971
Symbol
rumA1
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
cace
Clostridium aceticum
Brite
KEGG Orthology (KO) [BR:
cace00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cace03009
]
CACET_c28050 (rumA1)
Enzymes [BR:
cace01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CACET_c28050 (rumA1)
Ribosome biogenesis [BR:
cace03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CACET_c28050 (rumA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_15
N6_N4_Mtase
FtsJ
Methyltransf_12
Met_10
Methyltransf_32
PrmA
Methyltransf_11
TRAM
PCMT
UPF0020
NodS
Ubie_methyltran
DUF5612
TPMT
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
AKL96250
UniProt:
A0A0D8I9D7
LinkDB
All DBs
Position
complement(2954795..2956429)
Genome browser
AA seq
544 aa
AA seq
DB search
MLKRKEIVEFKIEDSEFGGKGYGYVGDVKVTVKHGIPGQLVRAAIKKIKKKQAEAQVLEI
LENSPLEDQSPCQHFGNCGGCFQQTVAYEEQLLLKEKQVKRLFEEFAIKNYTWLGIEGSP
TAFDYRNKMEFSFGDEEKGGPLTLGMHKRGRHYDIVTVDACLIMDEDFRKLLTTILDYFK
EKGLSYYNTRRHEGYLRHLVIRKAHFTGEILINLVTTTQSQINIQDLVEKLLALELRGGI
VGFLHTFNDNLADIVQSDKTDILYGRDYVVEELLGLKFKISAFSFFQTNSQGAEKLYSIV
RDFVGEAKGQVVFDLYCGTGTIGQIVAPNAEKVVGIEIIEEAVEAARENANSNNLNNCSF
IAGDVKEEVKKLKEKPDIIIIDPPRAGIHPQALKDIISFDAEKIVYVSCNPKTLVRDLVE
LEASGYQVDKAQLMDMFPHTPHVETVVLLSRKNPDDRIEIDIDLDELDITSAESKATYEE
IKDYVLKNHSMKVSSLYISQVKRKLGIEMGINYNLPKSKDVRVPQCPPEKGRFITEALNH
FRMV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagagaaaagaaattgtagaatttaaaatagaagatagtgagtttggcggcaaa
ggttatggttatgtaggggatgtaaaagttactgtaaaacatggtataccaggtcaattg
gtaagagctgctatcaagaaaataaaaaagaagcaggcagaagctcaggttttagaaata
ctagagaactctccattagaggatcaatctccttgccagcattttggaaactgcggtgga
tgttttcaacagacagtagcctatgaggaacaactactattgaaagaaaagcaagtaaaa
agactttttgaagagtttgctatcaaaaattatacgtggttaggtatagaaggcagtcct
acagcttttgattataggaataaaatggagttttcctttggggatgaggaaaagggggga
cctttgactctagggatgcacaaaagagggagacattacgacattgtcacagtagatgcc
tgtctgattatggatgaggattttagaaagttattaacaacaatcctagattattttaaa
gaaaagggtttgtcctattataatactcgaagacatgaagggtatttgagacatttggtg
ataagaaaagctcattttacaggggaaatcctaataaacttggtaacgacgacacagagt
caaataaatatacaggacttggtggaaaaattattggcattagaattacgtggaggtatt
gtaggctttttacataccttcaatgataaccttgctgacattgttcaaagtgataaaacc
gatatcttatatggtagggactatgtagtagaagaacttttaggattgaaatttaaaata
tctgccttttccttctttcaaaccaattctcaaggagcagaaaaactctattctatcgta
agagactttgtgggagaagccaaaggtcaagttgtatttgatctttattgtggtacgggt
accataggacaaatcgtagctcctaatgcagaaaaagtagtagggattgaaatcatagaa
gaagctgtagaggcagctagggaaaatgctaattcaaacaacttaaacaattgtagtttt
atcgcaggagatgtaaaagaagaagtaaaaaaattaaaagaaaaaccagacatcatcatc
atagacccaccaagagcaggaatccatccccaggcactgaaggatattatcagttttgat
gcagaaaaaatcgtctatgtatcttgcaatcctaaaacattagttagggatttagtagaa
ctagaagccagcggttatcaggtagataaggcgcagttgatggatatgtttccgcataca
ccgcatgttgagacggttgttcttttgtccagaaaaaatccagacgatagaattgagatt
gacatagatcttgatgagcttgatattactagtgctgaaagcaaagctacctatgaagaa
ataaaggattatgttttaaaaaatcatagtatgaaagtatccagtctatatatttcacaa
gtaaaaaggaaattaggtatagagatgggcataaactataatcttccaaaatcaaaagat
gtacgtgtgccacaatgtccaccagaaaagggaaggttcataactgaagcattaaatcat
tttaggatggtatga
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