Candidatus Cloacimonas acidaminovorans: CLOAM0820
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Entry
CLOAM0820 CDS
T04769
Symbol
uvrB
Name
(GenBank) excinulease of nucleotide excision repair, DNA damage recognition component
KO
K03702
excinuclease ABC subunit B
Organism
caci
Candidatus Cloacimonas acidaminovorans
Pathway
caci03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
caci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLOAM0820 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caci03400
]
CLOAM0820 (uvrB)
DNA repair and recombination proteins [BR:
caci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLOAM0820 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CLOAM0820 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
P-loop_SecA
AAA_30
AAA_22
AAA_16
UB2H
Kinesin
AAA_5
DUF87
Motif
Other DBs
NCBI-ProteinID:
CAO80702
UniProt:
B0VH87
LinkDB
All DBs
Position
complement(947630..949633)
Genome browser
AA seq
667 aa
AA seq
DB search
MQRFKLISDYTPSGDQPEAIEALIKGIEEGKRHQVLLGVTGSGKTFTIANVIAHFNRPTL
VLSHNKTLAAQLYGELKQLFPENAVEYFISYYDYYQPEAYIPGKDIYIEKDSSINEQIEK
LRLRATMSLMERRDVIIVSSVSCIYGLGVPEEYREALISLKKGMKMDREELIHQLISAHY
SRNDIAFERGAFRVRGDVVDIFPAYLEHCLRVEFFGDEIYRLEKIHPISCQPLGEVEKYD
VYPAIHFLMNEEKLRKALISIEQEMNERVAWFLQNQKYVEAERLKQRTTFDLEMLHELGY
CSGIENYTRHLTGVKPGEPPNCLLDYFPEDFLMVIDESHVTIPQVHGMFAGDYTRKKNLV
EYGFRLPSAFDNRPLRFEEFEKFMHQVIFVSATPADYELSLTKGEIVEQVIRPTGLVDPE
IEINPIKHQVDDLIAQIKERVAKKQKILVMTLTKRMSEDLSIYLNNAGIKARYMHSDIDS
IERAKIIRDFRLGEFDVIVGINLLREGLDLPEVSLVAILDADKTGFLRSTRSLIQISGRA
ARNVDGKVIFYADEITDAIKQTVAETNRRRAKQLAYNEEHGITPQTIYKTIDQIMQSTAI
AEGYDKIAKQATFEKPSAKEFMEYLELDNKEKIIELLTKEMNKAAANLDFEHAAELRDKL
WELQQNI
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcttcaagcttataagtgattatactccttcaggtgaccagcccgaagccata
gaagcccttattaaaggtattgaagaaggcaaaaggcatcaggttcttttaggcgttact
ggtagtgggaaaacctttactatagctaatgtgattgctcattttaatcgtcctaccctt
gttttatcgcacaataaaaccctcgcggctcaactttatggtgaattgaaacaactcttt
ccggaaaatgcggtagaatattttatcagttattacgattattatcagcccgaggcatac
attcccggtaaggatatttacattgaaaaagatagcagtatcaatgaacagatagaaaaa
ctgcgtttgcgtgctacaatgagtttgatggaaagaagggatgtaattatcgtttcgtct
gtttcctgcatttatggacttggtgttccggaagaatatcgtgaggcattaatttccctg
aaaaaaggtatgaaaatggaccgtgaagaacttattcatcaactgatatcggctcattac
agcagaaatgatattgcctttgaaagaggtgctttcagggttagaggcgatgtagtagat
atttttcctgcctatttggaacactgtttgcgcgtggaattctttggggatgagatttat
cggctggaaaaaattcatcctatttcctgtcaacccttgggagaagtagaaaaatacgat
gtttaccccgcaattcactttttaatgaatgaggaaaaattgcgcaaagccctcatcagt
attgagcaggaaatgaatgaacgggttgcctggtttttacaaaatcaaaaatatgtggaa
gcagaacgcctgaaacaacgcacaacttttgacctggaaatgctccacgaactgggttat
tgtagtggcattgaaaattacacgcgtcacttaacgggagttaaacccggagaaccgcca
aactgtttactggattactttcctgaggattttttaatggtgattgatgaatcccatgta
actattcctcaagtgcatggaatgtttgccggggactacactcgcaaaaagaacctggtg
gaatacggttttcgtttaccttccgcttttgataaccgtcctttgcgttttgaagaattt
gaaaagtttatgcatcaagtaatcttcgtttctgccactcctgcggattacgaactaagt
ttaactaaaggcgaaattgtagaacaggtgattcgtcccaccggtttggttgacccggaa
attgaaattaaccctataaaacatcaggtagatgacctcatcgcgcaaatcaaagaacgg
gttgctaaaaaacaaaagatattggttatgacactaactaaaagaatgagtgaagacctt
agcatttatctgaataatgccggaatcaaagcccgctatatgcacagtgatatagacagc
attgaacgagctaaaatcatcagggactttcggttaggtgaatttgatgtaattgtaggc
attaatcttttaagagaaggtttagacctgccggaggtttcactggtagcgattttagat
gccgataaaactggtttcttgcgttctacccgttccctgattcaaatttctggtagagca
gccagaaatgttgatggcaaagtgattttttatgctgacgaaattaccgatgctattaaa
caaacagttgccgaaaccaatagacgccgtgctaaacagcttgcctacaatgaagaacac
ggaatcactcctcagaccatctataaaacaattgaccagattatgcaatccactgctatt
gctgagggctatgataaaattgccaaacaagctacatttgaaaaaccctccgctaaggaa
tttatggaatatctggaactggataataaagaaaaaatcattgaactgctcactaaagaa
atgaataaagccgctgcaaaccttgattttgaacacgccgcagaactgagagataaactt
tgggaactgcaacaaaacatataa
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