Candidatus Cloacimonas acidaminovorans: CLOAM1113
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Entry
CLOAM1113 CDS
T04769
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain (RNAP alpha subunit) (Transcriptase alpha chain) (RNA polymerase alpha subunit)
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
caci
Candidatus Cloacimonas acidaminovorans
Pathway
caci03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
caci00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CLOAM1113 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caci03021
]
CLOAM1113 (rpoA)
03400 DNA repair and recombination proteins [BR:
caci03400
]
CLOAM1113 (rpoA)
Enzymes [BR:
caci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CLOAM1113 (rpoA)
Transcription machinery [BR:
caci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CLOAM1113 (rpoA)
DNA repair and recombination proteins [BR:
caci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CLOAM1113 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_A_bac
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
Ribosomal_S6
Motif
Other DBs
NCBI-ProteinID:
CAO80975
UniProt:
B0VI04
LinkDB
All DBs
Position
complement(1309603..1310778)
Genome browser
AA seq
391 aa
AA seq
DB search
MMYLEPLQMPNEVDYDKASYSRTYGKFEIGPLEPGYGTTIGNTLRRILLSSIQGAAVRFV
RIEGLHHEFCPIPGTNSDYIDLILRLKQLVISSSSVEEVPLVLEHKGKGVITASMIQETA
YVKIINKDLYLLEVVDDIDFRLEMIVGIGRGYVSADRQNPEGKAVGFIPVDSIYSPVLKV
NFSVSHQRVKERMNFDRLIMEIYTNGAVEPSIALFLAAKILKDMAAKISLFEIEPQYIRD
IELDPELEEKERILKTSVKEIELSVRAANCLAQAKIETIGDLVSKTEAEMLKFRNFGKKS
LEEIVQKLKKYDLHLGMDVEGIYRQIREARSRGVIPAEEKEIPAPETKTKTKPKTKAVAE
KPAPKEKKTAESVTTATVRKPVPSSKKKVEK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatcttgaacctttacaaatgccgaatgaagttgattacgataaagcatcgtat
tcacgcacttacggcaagtttgaaatcggtcctttggaaccgggatatggcaccacaata
ggaaataccttgcgtcggattttgctctcttccatacaaggagccgctgttcggttcgtt
agaattgaaggtttgcatcatgaattttgtcctattccgggaacaaattctgattatata
gatttaattctacggttaaaacagctcgttatctcttccagttctgtggaagaagttcct
ctggttcttgaacataaaggaaaaggcgtaataactgcctctatgattcaggagaccgct
tatgtgaaaattatcaataaagacctctatctgctggaagttgttgatgatattgatttt
cgtttggaaatgattgtaggtatagggcgcggttatgtttcagcagacaggcaaaatcct
gaaggtaaggcagttggttttattcctgtagattccatttattcacctgttctgaaagtg
aacttcagcgtttcccatcaacgggtgaaagagagaatgaattttgaccgtttgattatg
gaaatttatacgaacggagccgtagagccatctattgctctatttcttgcggctaaaatt
ttgaaggatatggcagctaagatatctctgtttgaaattgaaccacaatatattcgggat
atagaattagaccccgagttggaagaaaaagaacgcattctgaaaacaagtgtgaaggaa
attgaacttagcgttcgtgctgccaattgtctggctcaagcaaaaattgaaaccattggc
gatttggtttccaaaacggaagccgaaatgctaaaattccgtaattttggcaaaaaatca
ctggaagaaatagttcagaaactgaagaaatatgatttacatctcggtatggatgttgaa
ggtatctatcgtcaaattagagaagccagaagcagaggagtaattcctgccgaagaaaaa
gaaattccagctccggaaacaaagacaaaaaccaaaccgaaaaccaaagcagttgctgaa
aaaccagcacctaaagaaaaaaagacagctgaatctgtaactactgcaacggtgcgtaaa
cccgttcccagttctaaaaagaaggtggaaaaatga
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