Candidatus Cloacimonas acidaminovorans: CLOAM1265
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Entry
CLOAM1265 CDS
T04769
Name
(GenBank) hypothetical protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
caci
Candidatus Cloacimonas acidaminovorans
Pathway
caci03410
Base excision repair
caci03430
Mismatch repair
caci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CLOAM1265
03430 Mismatch repair
CLOAM1265
03440 Homologous recombination
CLOAM1265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caci03400
]
CLOAM1265
DNA repair and recombination proteins [BR:
caci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CLOAM1265
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CLOAM1265
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CLOAM1265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
CAO81125
UniProt:
B0VII4
LinkDB
All DBs
Position
1467246..1468808
Genome browser
AA seq
520 aa
AA seq
DB search
MKQDEPNSNINISNDLLNQIIKSRNLTSLNLQTNLEMLPDEKLFANIDKVENRMRIALFE
NEPMVIFGHDDPDGITSTYILYNFLNSCGYQKHCYYIPNRNLEPHGIQDGFIEFVRQNDY
RLIVTVDNGIVSKEGVKNLNAMGCEVIITDHHIVQPDMLPPAFTIMNPQLPECPYPFKQL
AGVGVVLMLIRYLGQLWNHPVEPASYFWTAVGSIADKVPMIGLNRILVRYVLEHFDEVQD
ETVTFLLRNYNRINTMSDIFSFLQYTSHLIANGREPNGQHTAMRFILQLSDAKARLFEDL
ESQKNKWESELNRIFKFMDTLATDFVGNWFVYYDDEDVIPYTLLGTAATYVVSKLHIPAI
ILKYNNGVTVCEGRCGEDFNIMDAFTHCKKHLAQFGGHPRAAGFTMKPEHYDAFLECFNS
FLQKNYHPSKQEILSYDAEVCPKDLNWDNWKKLEILLPWGQLNPEPSFLIRNTSRVEITR
YVSLDNSGMDLPNKGKGDALVMWKAPNLVKVLSWQQKIDE
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaagatgaacctaatagtaatataaatatatctaatgatttattaaatcaaatt
attaagtcccgaaaccttacttccctgaatttgcagaccaatcttgaaatgctacccgat
gaaaagctttttgccaatattgacaaagtggaaaataggatgcggattgctctttttgag
aatgaaccaatggtgattttcggtcacgatgatcctgatggaataaccagcacctacatt
ttgtataacttcttaaattcctgcggttatcaaaaacattgttattatattcccaatcgc
aatctggagccccatggcattcaggatggttttattgaatttgtgcgtcaaaatgattac
cgcttaatagttacagtggataacggcattgtttccaaagaaggggtaaaaaatctgaat
gcaatgggttgtgaagtaataataaccgatcatcatattgtgcagccggatatgttacct
cctgcatttacgataatgaatcctcagctgccggaatgtccatatccttttaaacagctt
gccggagtaggagttgttttaatgctgattagatatttgggacaactttggaatcaccct
gttgaacctgccagttacttttggactgctgttggctctattgctgataaagttcctatg
attggcttgaatagaatccttgttcgctatgttttagaacattttgatgaggttcaggat
gaaacagttacttttcttctgcgtaattataaccgtatcaatacaatgagtgatattttc
agttttctgcaatatacttcccatcttatagctaatggtcgtgaacctaatggccagcat
actgcaatgcgctttattctgcagttatcagatgccaaagccagactttttgaggatttg
gaaagccaaaagaataaatgggaaagtgaattgaacaggattttcaaatttatggatacc
ttggcaacggattttgtaggtaactggtttgtttattatgatgatgaagatgttattcct
tatactcttttgggaacagcggcaacttatgttgtaagcaaactgcatattcctgctata
atcctaaaatataataatggcgttacagtttgcgaaggcagatgtggagaggattttaac
ataatggatgctttcactcactgtaaaaagcacttagcacaatttggaggtcatcccaga
gcagcaggatttacaatgaaacctgagcattacgatgctttcctggaatgtttcaacagc
tttttgcagaagaattatcacccttctaaacaagaaatattaagctacgatgcagaggta
tgtcctaaagacctgaactgggataattggaaaaagctggaaattttgttaccttgggga
cagttgaatccggaaccttcatttttaattcgtaacacttccagagttgaaattacccgt
tatgtatctttggataacagcggtatggatttgccgaataagggaaaaggcgatgcgtta
gttatgtggaaagcccccaatctggttaaagtgttatcctggcagcaaaaaattgatgaa
taa
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