Candidatus Cloacimonas acidaminovorans: CLOAM1332
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Entry
CLOAM1332 CDS
T04769
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
caci
Candidatus Cloacimonas acidaminovorans
Brite
KEGG Orthology (KO) [BR:
caci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caci03032
]
CLOAM1332 (gyrB)
03400 DNA repair and recombination proteins [BR:
caci03400
]
CLOAM1332 (gyrB)
Enzymes [BR:
caci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CLOAM1332 (gyrB)
DNA replication proteins [BR:
caci03032
]
Prokaryotic type
DNA Topoisomerases
CLOAM1332 (gyrB)
DNA repair and recombination proteins [BR:
caci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CLOAM1332 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
CAO81188
UniProt:
B0VIP7
LinkDB
All DBs
Position
complement(1560538..1562436)
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AA seq
632 aa
AA seq
DB search
MQSSTYTASNIKVLKGLEAVRKRPAMYIGGTSERGLHHLVYEVIDNSIDEALAGYCDEII
CTITTEGNIRVEDNGRGIPVDIQKDMGVPAVQVVLTVLHAGGKFDDKSYKVAGGLHGVGV
SVVNALSEFLEVNIFKDGKEYFMRFERGLPVTELQVLGDTNKTGTVVTFRPDPLIFETTE
FSFDYLTSRLRELAFLNSGLRIILKDERSGRVHDFKYEGGIKSFVEYLNQNKKPLFPNPI
YISSVKEGMEFEVALQYNEGYQENIFSFANNINTTEGGTHLSGFKSGLTRAVNTYIKNAD
LLKNEKVSPSGEDIREGLTAVISLKIANPQFEGQTKTKLQNSEVEGIVNSAVYEKLMEYF
EEHPAEAKNITMKSILAARSREAARKARELTRRKTVLESGSLPGKLADCTLSDPEKTELF
LVEGDSAGGSAKQGRDRSFQAILPLWGKMLNTEKARVDKVLNNDKIQPIILALGAGIGQE
FDISKLRYHKIIIMADADVDGSHIATLLMTFFYRYMRPVIEEGKLYIAMPPLFQVRKGKQ
KVYVYNEEERDKAIREFGEKGVLVQRYKGLGEMNAEQLWETTLDPKNRKMIAIKMDDAIE
ADRMFTILMGDEVEPRREFIQENARYVKNLDV
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagctcaacttatacagccagcaatatcaaagtgctgaagggtctggaagctgtc
cgtaaaaggcctgcaatgtatattggaggcaccagtgaacgcggtttgcatcacttggtt
tacgaagttatagataattctatagatgaagcattagcaggttattgcgatgaaattatt
tgcactataaccaccgaaggaaatattagagtggaagataacggacgcggaattcctgtt
gatatccaaaaagatatgggagttccggcagtgcaggttgtcttaacggttctgcatgca
ggggggaaatttgacgataaaagttataaagtagccggaggtctgcatggagttggtgtt
tcagtagtaaatgctctttcggaatttctggaagtgaatatttttaaggacgggaaagaa
tactttatgcgctttgaaagaggtcttccggtaaccgaattacaggttttaggggatacc
aataaaaccggaacagtagtaactttccgtcccgatccacttatttttgaaacaacggaa
ttcagctttgattatttaacttcccgcttaagagaactggcattcctgaatagtggatta
cgcattattctaaaagatgaacgcagtggtcgggttcatgattttaaatatgagggggga
ataaaaagttttgtggaatacttaaatcagaacaaaaaaccgcttttccccaatccgata
tacatttccagcgtgaaagaaggaatggaatttgaagtagcccttcaatataacgagggt
tatcaggaaaacattttcagttttgccaataatattaatactactgaagggggaacccat
ttaagcggatttaaaagcggtttaacgcgtgctgtaaatacctacatcaaaaatgccgat
ctgcttaaaaatgaaaaggttagtccttctggtgaagatattagagaagggcttactgca
gttatttcacttaaaattgccaatccccaatttgagggacagaccaaaaccaaactgcaa
aattcggaagtggaaggaattgttaatagtgctgtttacgaaaagcttatggagtatttt
gaagagcatcctgctgaagcaaaaaatattacaatgaaaagtattttagcagcacgcagt
agagaagcagccagaaaggcaagagaacttaccaggagaaaaactgtcctggaaagtggc
tccctgccaggaaaacttgctgattgcactttaagcgatccggaaaaaacagaactcttt
ttagtggagggtgactcggcaggcggaagcgccaaacaaggaagagatcgttcttttcag
gcaatacttcctttgtggggaaaaatgctgaacacggaaaaagcaagagtggataaggtt
ttgaacaacgataaaattcaaccgattattttagctttgggagctggaattggacaggaa
tttgacattagcaaactgcgttatcataaaatcattataatggctgatgctgatgtagac
ggctctcatattgccactttgctaatgacctttttctatcgctatatgcgtcccgtaatt
gaagaaggtaaactctatattgcaatgccgcctctttttcaggttcgcaaaggaaaacag
aaggtttatgtgtataatgaagaagaacgggataaagcaattcgggaatttggtgaaaaa
ggtgtgcttgttcaacgctataaaggacttggtgaaatgaatgcggaacagctttgggaa
accactcttgatcctaaaaaccggaaaatgattgctatcaaaatggatgatgccattgag
gcggatagaatgtttaccattttaatgggcgatgaagtagaacccagaagggaatttatt
caggaaaatgcccgctatgtaaaaaatcttgatgtttaa
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