Candidatus Cloacimonas acidaminovorans: CLOAM1746
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Entry
CLOAM1746 CDS
T04769
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
caci
Candidatus Cloacimonas acidaminovorans
Pathway
caci03030
DNA replication
caci03430
Mismatch repair
caci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLOAM1746 (dnaE)
03430 Mismatch repair
CLOAM1746 (dnaE)
03440 Homologous recombination
CLOAM1746 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caci03032
]
CLOAM1746 (dnaE)
03400 DNA repair and recombination proteins [BR:
caci03400
]
CLOAM1746 (dnaE)
Enzymes [BR:
caci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLOAM1746 (dnaE)
DNA replication proteins [BR:
caci03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLOAM1746 (dnaE)
DNA repair and recombination proteins [BR:
caci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLOAM1746 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
SSL_OB
Motif
Other DBs
NCBI-ProteinID:
CAO81582
UniProt:
B0VJC8
LinkDB
All DBs
Position
complement(2054259..2057699)
Genome browser
AA seq
1146 aa
AA seq
DB search
MSFVHLHNHTQYSMLDGACRVDRMIKLAKEYAMPAVAITDHGNLFGAIDFYKTAKNAGIK
PILGIEAYIINGDLESETGKNEIRYHLILLAQNEQGYKNLMKLSSYSYIKGFYYKPRISK
TLLKQYSEGLICLSACVKGEIPALIYNDRMQQAEEVALWYKDLFQEHFYIEIQDHNLEPE
KKIMPRLIDLAKKLEIPMVLTNDCHYLNKNDYEAHDILLCIQTGKLLHDPDRLHYGTNQL
YFKSPEEMKELFPDVPEAYNNTLKIADMVDLELHYDKFLLPNIETPPEFKTMGEYLRFLC
YENAKIKYPDLNETIKQRIEYELEVIDRMGFNGYFLIVKDIIDNARKQSVPVGPGRGSGA
GSIVAYLLDITQIDPLQYGLVFERFLNPDRISMPDIDIDFCAQNRSKVIDYIIQRYGRES
VTQIITFSTLGAKSVIKDVARVLSVPASEANAITKTIQGNKTLDEAYNQYPEFSSLINSN
DLYRTIFKHSKVLEGLVRQTSVHPAGVVIAPGDLTDYVPLACSTQKGEEKVILVQFEGKW
LNDLKLLKMDILGLKNLTLIQKTIDLVKQAQDIDIDINHISLEDKKVYNILGKGETDGVF
QFESDGMRKYLIELKPNKIEDLIAMVALYRPGPMQFIDSYIARKHGREKVVYDHPLMENA
LKETYGVTIYQEQVMQIAREMGGFTGGEADSLRKAMGKKNSDLMQQYQEKFRQGAKAQNV
PDAVIEKIWQDWLRFAEYAFNKSHATCYALVAYQTAYLKAYYPVEFMAALLSLEDDPTKI
PGKIEVCKKMGIKIIPPNINRSDSEFRVHGKEVLFGLRAIKNLGDAAMRDIIEDRNQNGP
YTSIFEFCNRLDSTSVNKTILESLIASGAMDELEGTRAQKWNVIELALQFSSNDQKDRKR
GQSTIFDFMDTEDEDNNYYPPLPSVEPWSYIYQLEKEKEVLGFYLSGHPLFEYRSLIKHL
TNANSSTGKTKNNGELLIAGIINNISKKKDNKGNPIAFVEFEDLCGKFEVPLFNKDFMQY
HKKISPGKVFFIIGNKSTFNGNEDSILRILPNALIDFKELPSELSGEIKINIPNEHLKNG
LLTELGNRISRNTGKFKLITKFQSEDMNDYQLESRKLFFPDEALLNWLEKEKIDFQVRVV
TNGKNN
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgttcatttgcataaccatacacaatacagtatgttggatggtgcctgcaga
gttgacaggatgataaaattggctaaagaatatgctatgccggctgttgctataacggat
cacggcaatctttttggtgccattgatttttataaaacagccaaaaatgccggtatcaaa
cctattctcggtattgaggcatacattatcaatggcgacctggaaagtgaaaccggcaaa
aatgaaatcaggtatcatttaatattactcgctcagaatgaacagggctataaaaacctg
atgaaactctcctcctattcctatattaaaggattttattataagcccagaatttccaag
accctgctaaaacaatacagcgaaggtctaatttgcctttctgcctgcgttaaaggtgaa
attcccgctctgatttataatgaccgaatgcaacaggcagaagaagttgctttgtggtat
aaagacctttttcaggaacatttttatattgaaattcaggatcataatctggagccggaa
aagaaaattatgccccgtctgatagatttggcaaaaaaactggaaattccgatggtgcta
actaatgactgtcactatttgaataaaaatgattatgaagcacacgacatattgctttgt
attcaaacaggaaagcttttacacgatcccgaccgtttgcattacggaactaatcagtta
tattttaaaagcccggaagagatgaaagaactctttcccgatgttcctgaagcatataat
aataccttaaaaatagcggatatggtagacctggaactgcattatgacaaatttctactg
cccaatattgaaacccctcccgaatttaaaacgatgggtgaatatctgcgttttctttgt
tatgaaaatgccaaaattaaatacccggatttgaatgaaaccataaagcaacgcattgaa
tatgagctggaagtgattgacagaatgggttttaatggctattttctcattgttaaagat
attattgataatgctcgtaaacaaagtgttcctgtaggtcccggtcgtggttccggtgcc
ggaagtattgttgcttacttacttgatataacacaaattgatcctttgcaatacggactg
gtttttgaaagatttctgaatcccgatagaatcagtatgccggatatagatattgatttt
tgcgctcaaaacaggagcaaagttattgattatattatacaacgctatggaagagaaagc
gtaactcaaataataactttttctactttgggagctaaaagcgtaattaaagatgtagcc
agggttttgagtgttccagcttccgaagcaaatgctataacgaaaactattcaaggcaat
aaaactttggatgaagcatataaccaatatccggaattttcctccctaatcaatagtaat
gatttatatcgcacgatctttaaacattccaaagtgctggaaggtctggtgcgtcaaaca
agtgttcatcctgcaggagtcgttattgctcccggagaccttacggattatgttcctctt
gcctgtagcacgcaaaaaggtgaagaaaaggttatcctggtgcaatttgagggaaaatgg
ctgaatgatttgaagctgttgaaaatggacattttgggtttaaaaaatcttacccttatt
caaaagacgattgatttggtgaaacaagcgcaagatattgacattgatatcaatcacatt
tctctggaagataaaaaggtctataacatattgggtaaaggcgaaactgacggtgttttt
cagtttgaatcggatggaatgcgtaaatacctgatagaactgaagcccaataagattgag
gacttaattgctatggtagctctctaccgaccaggtcctatgcagtttatagatagttat
atagctcgtaaacacggacgcgaaaaagtggtttatgatcatccgctgatggaaaatgcg
ctaaaagagacctacggagtaacaatctatcaggaacaggtgatgcaaattgcccgtgaa
atgggtggttttacaggtggcgaagcagatagtttaagaaaagctatggggaaaaagaat
tcggacttaatgcaacaatatcaggaaaaattcaggcagggagctaaagcccaaaatgtt
cctgatgcagttatagaaaagatttggcaggattggttacgctttgcggaatatgctttt
aataaatcccatgctacctgctatgctttagttgcctatcaaacagcatatctgaaggca
tattacccggtggaatttatggctgccttgctttccctggaggatgatccgacaaaaata
cccggtaaaattgaggtctgtaaaaagatgggtataaaaatcattcctccgaatataaac
cgtagcgatagtgaattcagggttcacggtaaagaagtcctttttggcttacgagcaatt
aaaaatctgggtgatgccgcaatgcgggatattattgaagatagaaatcaaaacggtcct
tacaccagtatatttgaattttgcaaccgtttagatagtaccagcgtaaataaaaccatt
ctggaaagtttgattgcctcaggtgcaatggatgaacttgaaggcaccagagctcaaaaa
tggaatgtaatagaactggcgttgcaatttagcagtaatgaccagaaagatagaaaaagg
ggacaaagcactatttttgattttatggatactgaagatgaggataataactattaccct
ccactgccttcggttgaaccctggtcttatatctatcagctggaaaaagaaaaggaggtt
ttgggattctatttaagcgggcatccgctgtttgaatatcgctcgttaataaaacacttg
accaatgccaattccagcactggcaagacaaaaaataacggtgaattgcttattgcggga
attataaacaacatttccaaaaagaaagataacaaaggtaaccctattgcctttgtggag
tttgaagacctttgcgggaagtttgaagtgcccttgtttaataaggattttatgcagtat
cacaaaaaaatcagcccgggaaaggtcttttttatcattggcaataaatccacctttaac
ggcaacgaagatagcatcttaagaattttaccaaatgctttaattgactttaaggaatta
ccttcggaattgagcggagaaatcaaaatcaatattccaaacgaacatctgaaaaacgga
ttactaactgaactgggtaatagaatatctcgtaatacaggcaaatttaaattgataacc
aaatttcaaagcgaagacatgaatgattatcaattggaatctcgcaaactcttctttcct
gacgaagcattgctgaactggctggaaaaagagaaaattgattttcaggttagggtagta
accaatggaaaaaataattag
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integrated database retrieval system
