Cutibacterium acnes KCOM 1861 (= ChDC B594): RN83_04580
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Entry
RN83_04580 CDS
T04624
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
cacn
Cutibacterium acnes KCOM 1861 (= ChDC B594)
Pathway
cacn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cacn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RN83_04580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cacn03400
]
RN83_04580
DNA repair and recombination proteins [BR:
cacn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RN83_04580
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RN83_04580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
AAA_21
nSTAND1
AAA_33
APS_kinase
AAA_22
nSTAND3
DnaJ_CXXCXGXG
AAA_25
ATPase
AAA_23
NACHT
AAA_14
Viral_helicase1
SLFN-g3_helicase
ATPase_2
cobW
NB-ARC
Septin
MeaB
NTPase_1
ExoX-like_C
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ALD69459
LinkDB
All DBs
Position
991571..994537
Genome browser
AA seq
988 aa
AA seq
DB search
MTPVSDHIIVRGAREHNLRNVNLDLPRDAMIVFTGLSGSGKSSLAFDTIFAEGQRRYVES
LSSYARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEIHDYLRLLWARVG
KPHCPVCGELISRQTPQQIVDRLMALDEGTKFQVFAPVIRGRKGEYVELFRQLTTDGFTR
VRVDGDVHRLGQVPPLDKKRKHDIDVVVDRIAVKPSAKQRLTESVETALGLAHGIVGVDF
VDRDLSDPYRERRFSETMACPNQHDIDIEELEPRQFSFNGPWGACPTCSGLGATLEVDPE
LIVPDSGLSLLEGAIAPWSGPRVANHYQHVFAGLAENHGFDATLPWSELPVKARKLVLHG
DGDPVMISYRNRFGRVRTYSQNYEGVLHYVRRRYDEAETDSARSRWGQYLREVPCRDCHG
KRLKPTSLAVTVGGRNIAEVSDMSIGEASEFLNALTLTEREATIAGRVIKEVRARLRFLV
DVGLDYLTLSRSAGSLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIDTL
VRLRDLGNTLIVVEHDEDTIRMADWVVDVGPGAGEHGGEVVVSGTVDELLASERSVTGAY
LSGKRSIPLPATRRPRTGRELVVRGARENNLKGMDVTFPLGQLVVVTGVSGSGKSTLVNQ
ILYTSLAHRIHSARMVPGKHETITGVEEIDKVIHVDQSPIGRTPRSNPATYTGVFDKIRA
LFAQTPEAKMRGYQPGRFSFNIKGGRCENCQGDGTIKIEMNFLPDVYVPCEVCHGARYNR
ETLEVHYKGKTIAEVLDMPIEEACTFFEPISSIHRHFQTLVEVGLGYVRLGQPATTLSGG
EAQRIKLASELQKRSTGRTLYVLDEPTTGLHFEDIRKLLLVLQRLVDQGNSVFVIEHNLD
VIKTADWIIDMGPEGGNGGGTVVAKGTPEQVAAVEGSYTGQYLSEILAGHEVAVGDAALV
EAPADAGKRKTTARRKAKKTTSPRKKSR
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgacacctgtgagtgaccacatcatcgtccgaggcgcccgggaacacaacctgcgcaat
gtcaatctggaccttcctagggacgccatgattgtgttcaccggtctgtcgggatcgggc
aagtcctcccttgctttcgacactatcttcgccgagggccagcgtcggtatgtggagtcg
ctttcctcctatgcccgccagtttctgggtcagatggataagcccgacgtcgactttatc
gagggcctcagcccggcagtttccatcgatcagaagtccacatcccgcaaccctcggtcg
accgttggcaccatcacagagatccatgattatctgcgcctgctctgggcccgcgtcggt
aaaccccactgcccggtgtgcggcgagctcatcagccgtcagaccccgcagcagattgtc
gaccgccttatggcgctcgacgagggtactaagttccaggtcttcgccccggtgattcgt
ggacgcaaaggcgagtacgtcgagctgttccgacagttgacgaccgatggcttcacccga
gtacgggtggacggagacgttcatcggcttggacaggtgccaccgcttgataagaagcgc
aagcacgacatcgacgtcgtcgttgatcggattgcagtcaagccgtctgctaagcagcgc
ctcaccgaatcggtggagacggcgttggggctggcccacggcatcgtcggcgtcgatttc
gtcgaccgcgatctgtctgatccgtaccgggagcgtcggttctccgagacgatggcttgc
ccaaatcagcatgacatcgacatcgaggagctagagccgcgtcagttctccttcaatggg
ccctggggtgcctgcccgacctgttctggtctgggcgcgacactcgaggtcgacccggaa
ttgatcgtccccgattccggtctgagcctgcttgagggagccattgcgccctggtctggg
ccacgggtggcgaaccattaccagcacgtctttgctgggctggcggagaaccacgggttt
gacgcgactcttccgtggtccgagttgccagtcaaggctcgcaagctggtcctgcacggt
gatggcgacccggtcatgatctcgtaccgcaaccgattcgggcgggtgcgcacctactcg
cagaattacgagggagtgctgcattatgtgcgtcgacgctacgacgaggccgagacggac
tctgcacgctcccggtggggccagtatctgcgtgaggtaccgtgccgagactgtcatggc
aagcgtctcaagccgacgagcctggctgtaacggtcggtgggcgaaatatcgccgaggtc
tcagatatgtctattggagaggcttctgaattcctcaatgcgttgacgttgaccgagcgg
gaagccaccatcgcggggcgagttatcaaggaggttcgcgctcggctgcgattccttgtc
gatgtcggtctcgactacctcaccttgtcacggtcggcggggtccttgtcaggtggtgag
gctcagcgtattcgactcgctacccagattggttcaggtttggtcggggttctctacgtc
cttgatgagccctccatcggcttgcaccaacgtgacaaccgacgcctcatcgacaccctt
gtgagattgcgagatctcggtaacaccctcatcgtcgtcgagcatgatgaggacaccatt
cggatggcggactgggttgtcgacgtcggcccaggggccggtgagcacggtggtgaggtc
gtcgtgtcaggaaccgttgacgagctgctggccagtgagaggtccgtgaccggtgcgtac
ttgtcgggcaagaggtcgatcccattgccggcgacccgacgcccccgcacgggacgtgag
ctcgttgtcaggggagcccgtgagaacaacctcaagggaatggatgtcaccttcccgcta
gggcaactcgtcgtcgtcaccggggtgagcggctcgggcaagtccactttggtcaaccaa
atcctctacacatcgctagcgcatcgtatccatagcgccaggatggtaccgggtaagcat
gagacgatcaccggtgtcgaggaaatcgacaaggtgattcacgtcgaccagtcgccgatc
ggacgcacaccaagatcgaatccggccacctataccggtgtcttcgacaagatccgtgct
ctctttgcccagacccccgaagctaaaatgcgcggctatcagccgggtcggttctccttc
aacattaagggtggacgctgtgagaactgtcagggtgacggcaccatcaaaatcgagatg
aacttcctgcctgacgtctatgtgccctgtgaggtgtgccacggtgcccggtacaaccgt
gagaccttggaggtccattacaaaggtaaaacgatcgctgaggtcttggatatgcctatc
gaggaggcttgcaccttcttcgaaccgatttcgtcgatccatcgccacttccagaccctc
gtcgaggttggtttgggatacgtcaggctcggccagcccgcgacgaccctgtctggtggg
gaggctcagcgcatcaagctggcctccgagttgcagaaacgttccacgggtaggacgctg
tatgtccttgacgagcccaccaccggcctgcacttcgaggacatccgcaagctgctgctg
gtgttgcaacgtcttgtcgatcaaggcaactcggtcttcgtcattgagcacaatctggat
gtcatcaaaaccgccgattggatcatcgacatggggcccgaggggggaaatggcggcgga
accgttgtcgctaagggcactccagagcaggttgccgccgtcgaggggtcctacaccggc
cagtatctttcggagatcctggctgggcacgaggtagcagtcggggacgcggcgctcgtc
gaagcgccagcggacgccgggaaaaggaaaaccaccgccaggaggaaggcaaaaaagacc
acgagcccacgcaagaagtcgcgttga
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