Cutibacterium acnes KCOM 1861 (= ChDC B594): RN83_05430
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Entry
RN83_05430 CDS
T04624
Name
(GenBank) ribonuclease
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cacn
Cutibacterium acnes KCOM 1861 (= ChDC B594)
Pathway
cacn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cacn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RN83_05430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cacn03019
]
RN83_05430
Messenger RNA biogenesis [BR:
cacn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RN83_05430
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
HDOD
FBF1
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
ALD69593
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Position
1170891..1172519
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AA seq
542 aa
AA seq
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MLIALIAVSVLAVAAIIGSLADRRAIGRRAERAESERDVKALELSRSQERLSRASQDLAD
SRKDVAKARAELESSRTRASDEARRADHADQARRSAEALLEINRRSVEELTERDHRLQEA
RRHLEEGLDKIEQDRLELAERSSQLDERDAELDRRHGQIVTELERAAGMSLDEARDELVE
HLGREARVFAENSARAIVTEATASAEAKARHIVAEVIQRCSSEMVADTVVSVVPLPSNEM
KGRVIGREGRNIRTFEQVTGVTVIIDDTPEIVLLSCFDPMRREVARQALTDLVEDGRIHP
ISIERAHQRAVDRIEDMCLDAAADALSKAGIDDIDDRLLPILGSLRFRTSYGQQVLDHCV
ECAQLAANLAAEIGADIEICRRAAFLHDLGKSLTPGVEGSSHAAIGAELARRYGESEEVI
HAIAAHHDEIDPVSVTDFIVKAADAISAARPGARRESLEAHVRRMDTIEEMATSFPGVVR
AFALQAGREVQILVDPGAVDDHQASRLARQIALAIGEQVTVPGRTRVTVIRSFQAIETVG
DA
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcgcactcatcgcagtgtcggtgctcgcagtagcagctattatcggctcgctg
gcagaccgtcgagccattggcagaagggcggagcgagcggagtcagagcgcgacgtcaag
gccttggagctctcccgaagtcaagaacggttgtcccgggcaagtcaagatctcgccgat
agccgcaaggatgtcgctaaggctcgagcggagctcgagtccagccgcacccgggcctcc
gatgaagctcgccgtgccgaccatgctgatcaagcccggcgtagcgccgaggccctctta
gagattaatcgtcgctccgttgaagaactgaccgaacgcgatcaccggctgcaagaagct
cgccgccatctcgaagaggggctcgacaagatcgagcaggaccggttggagctagccgaa
cgtagttcacaacttgatgagcgtgatgccgagcttgatcgacgtcatggtcagatcgtt
accgaattggaacgggccgccgggatgtccctcgatgaggcccgcgatgagctcgttgag
catctgggacgggaggctcgcgttttcgccgaaaacagtgcccgtgccatcgtcaccgaa
gcgacggcgtcggctgaggctaaggctcgccatatcgtggcggaggttatccagcggtgt
tcttccgagatggttgctgacaccgtcgtcagtgtcgtgccgttgcctagcaacgagatg
aaaggccgagtcattggtcgagaaggtcgcaatattcgcacctttgagcaagtcactgga
gtgaccgtcatcattgatgacaccccggaaatcgtgctattgagttgcttcgatccaatg
cgacgtgaggtggctcggcaggctctcaccgatttggtcgaggacgggcgaattcacccc
atcagtatcgaaagagcccatcaacgagcggtcgaccgcatcgaggacatgtgccttgac
gctgccgctgacgctctgtcgaaggcgggaattgacgatattgatgaccgtctgctgccg
atcctcggctcattgagattccggacctcctatggtcagcaggtgctagatcactgcgtc
gagtgcgctcagctggcagccaatctggctgccgaaattggagctgatatcgagatctgc
cgtcgggctgcgtttttacacgacctcggcaagtccctcactccaggtgtcgagggaagt
agtcatgctgctattggtgccgagctagcacgtcgttatggtgaatcggaggaggttatt
cacgctatcgctgctcatcacgacgagattgatccggtgagtgtcactgacttcatcgtc
aaggccgcggatgctatctctgctgctcggcctggggctcgacgtgagtccctcgaagcc
cacgttcggcggatggacaccatcgaagagatggctaccagctttcccggggtcgtgcgc
gcgtttgcgctgcaagcagggcgtgaggtgcagattcttgtcgacccgggcgccgtcgac
gatcaccaagcctcgcgccttgcccgccagatcgcccttgcaataggggagcaggtcact
gttcccggacggacccgggttactgtgatccgttcgttccaggcaatagagaccgtcggg
gacgcgtga
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