Cutibacterium acnes KCOM 1861 (= ChDC B594): RN83_06970
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Entry
RN83_06970 CDS
T04624
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cacn
Cutibacterium acnes KCOM 1861 (= ChDC B594)
Pathway
cacn03420
Nucleotide excision repair
cacn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cacn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RN83_06970
03430 Mismatch repair
RN83_06970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cacn03400
]
RN83_06970
Enzymes [BR:
cacn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RN83_06970
DNA repair and recombination proteins [BR:
cacn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RN83_06970
MMR (mismatch excision repair)
Other MMR factors
RN83_06970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ALD69847
LinkDB
All DBs
Position
complement(1505814..1509026)
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AA seq
1070 aa
AA seq
DB search
MTSLIGDAPVDGVDVAALLGIPISAEQERAVQAPLKPCAVIAGAGTGKTTVMAARVVWLV
ASRLVSPEEILGLTFTNKATAELSERIESNLTRVGLLTSEQPRPTVATYDSFAGTLVNDY
GAWDGINTGAHLITAARAYQLAAEVIMGLNKAPLAATHMGPTFIAQAVVKLAGAMASHDA
SPGKVRRADARWRQMLLDAPTKRGGDRYADIDKWLSRVDEREELLDLVAAYQNLKKERGL
VEFGDRMVQALHLVTHHPRVGEELRARYRVVLLDEYQDTSSAQADVLAALFSGPDSAHGM
GHPVMAVGDPLQAIYEWRGAAASNILEFHRRFPNEGTPAQVLSLATNRRCADQIINAANV
ASEELRQTLSSAAESDDHDPAGDRAEVAVGQPLIAPEGNRRGEVTVAAYPDWVKECQACA
DILVEAKERGTIARWSDAAILVRRNSDVADLYDSLTARDVPVRFANLSGLLRLPDIAMVV
AHLRLLVDRQDDAAMATLLAAPRLGLSTDDLAMVYRRARALAKARAKDDGLDPDDVEIHL
SDAVMEGRPGGHERLQCAVKRVCAEIVEVDAHQGDSPDDLVLRIEAITGLIDDIAADDPH
RSAARRDHLDALWNAIREVRRSDPTMTITGIVTWLAAEEDVGDGLPRAATDDRDAVTVST
VHGAKGLEWPLVIIPDMAQGVFPSTSTPDNFASEAAVLPSFARGDASDISHPLSGSVVDT
KAYVAALKEDSQWAEARLAYVALTRAKERLVVSWHQWRPRRKGSLGPGRYADLLADMLGT
VWPDFGERPDNVIQAGTPWPVFADVGHGLIDNASRSVDDPGQADRVRAWWTDADALLKDA
RRHIDLQDEVALPPRLTTSQIVRLHANPQAFRDDLRRPMPRPADRGAGIGTAFHEWVSQR
LAPAEPIPLFDAEEVAELDEENTTQEAVAAEPSGAESRALRSLCQAFEESRWAGATVLAV
EKSFVMTIGQTVVRGRLDAVVADPDHPGDELVIDWKTSPPRSADPLQLSIYRLAWAQARG
IDPSRVRAVFHHVGANETISAEPLLDADQVAAILTTSSSGNRPTKNASDA
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcttgattggtgacgccccggttgatggtgtcgacgtggcagcgctgctaggc
atccccatttccgccgagcaggagcgagcagttcaagcgccactcaaaccctgtgcggtg
atagctggagcaggcacgggtaagacgacggtgatggccgctcgcgtggtgtggttggtt
gccagcagactggtaagcccggaggaaatcctcgggttgacatttaccaacaaggcgact
gcggaattatccgagcgcattgaatccaacctcactcgggtgggcctgttgacgtcagag
cagccccgtccgacagtggcgacctatgacagttttgcggggacactggtaaacgattac
ggagcctgggacggtattaacacgggggcacatctcataactgctgccagggcttaccag
ctcgcggcggaggtcatcatgggacttaacaaggctccgctggccgctacccatatgggg
ccaacgttcatagcccaagctgtagtgaaactggctggagccatggcctcacacgatgcg
agtccgggcaaggtcaggagagctgatgcccggtggcgccagatgctccttgacgctccg
acaaaaaggggaggggatagatacgctgatatcgataaatggctctcgcgagtcgatgaa
cgcgaagaactccttgatcttgttgccgcctatcagaatctcaagaaagaacgcggattg
gtcgagtttggtgaccgtatggttcaagccctccatctagtaactcatcacccgcgagtg
ggggaggagctgagggccagataccgtgttgttctcctcgacgagtatcaagatacatcg
tcggcccaggctgatgtgcttgctgcactattttcgggtccggactcagctcatggcatg
ggccacccagtgatggctgtcggcgatccgcttcaggccatttacgaatggcgtggcgcg
gccgccagcaacatcttagaatttcaccggcgcttcccgaatgaagggacgccagcccag
gtgctctctctcgcaaccaaccgcagatgcgccgatcagatcatcaatgcggcgaacgta
gcgtcagaagagttgcgacaaacgctgtcgtcagcggcggagtctgacgatcatgacccc
gctggcgatcgggctgaggtggcagtcggacagccgcttatcgcgcccgaggggaatcga
cgtggcgaggtcacggtggccgcatatcccgactgggttaaggaatgtcaggcgtgcgcc
gatatcttggtggaagccaaggaacgtggcaccatcgcacgctggtctgatgccgcaatc
cttgttcgacgtaattcagacgtggccgacctctacgactccctcactgctcgtgatgtc
ccggtgcgatttgcgaacttgtctggattgcttcgactcccggacattgccatggtggtt
gctcatcttcggttattggtggatcgtcaggatgacgcggcgatggcgactctacttgcc
gcaccacgtcttggactcagcacggatgatctggcgatggtgtatcggcgcgcccgcgct
ctggcgaaagctcgggccaaggatgatgggctagaccccgatgatgtcgagatccacctc
tctgacgctgtgatggaagggcgacccggtggtcatgaacgactgcagtgtgcagtgaaa
cgggtatgtgccgagatcgtcgaggttgacgcgcaccagggggatagccccgatgacttg
gttctgcgcattgaggccattacaggactcatcgacgatatagctgctgacgacccgcac
cggagtgcagcacggcgagatcacctggatgcgctatggaatgcgatacgtgaggttcgt
cgcagcgatcccactatgacgatcacaggaatcgtcacttggttggcggctgaagaagat
gttggcgacgggcttccccgggccgctaccgacgatcgcgacgctgtaacagtgtcgaca
gttcatggagccaaaggcctggaatggccgttagtcatcatccccgacatggctcaaggt
gtatttccgtcaacgtcgactccagacaacttcgcctcggaggctgctgtcctgccttcc
ttcgctagaggagatgccagcgacattagccatccactatcgggaagtgtcgtcgatact
aaagcgtacgtagcggcgctcaaggaggattcacagtgggctgaggctcgactcgcctat
gtggcccttacccgtgccaaagaacgattggtggtgtcgtggcatcaatggcgcccacgc
cgcaagggtagtttagggccaggtcgatatgcagaccttctcgccgacatgcttggaacg
gtgtggccggactttggtgagcgtcctgacaacgttatccaggctggcacgccctggcct
gtgttcgctgatgtgggtcacggcctcatcgacaacgcatcccgatccgttgatgatcct
ggacaggctgatcgggtgagggcgtggtggactgacgctgatgctctgctcaaagatgcg
agacgacacatcgatctgcaggatgaggtcgcgcttccacctcgcctgactacctcgcag
atcgtgaggctccacgccaatccgcaggcgttccgggacgatttgcgccgcccaatgcct
cgaccagctgacagaggagctggaattggtacagcattccatgagtgggtgagccaacgg
ctcgcgcctgcagaaccgatcccgctgttcgatgccgaggaggttgcggagcttgacgag
gagaacactacacaggaggctgtcgcagctgagcctagtggtgccgagagccgtgcgctg
cggagcctttgccaagcctttgaagagagtcgctgggcgggcgccactgtactggcagta
gagaaatcctttgttatgacgatcggtcagacggtcgtgcgtggtcgtcttgacgccgtc
gtcgctgatccggatcaccccggagatgagctcgtcattgattggaagacctcaccacca
cgctcagcagacccgctccagctatccatctaccggttggcgtgggcgcaggcgaggggg
attgatccgtcgagggtgagggcggtgttccatcatgttggcgcaaatgagactattagc
gccgaacctctcttagatgcggaccaggtagcagctattttgacgacatcgtcttccggg
aacagaccgacgaagaatgcgtctgacgcgtga
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