Cognatishimia activa: HZ995_13900
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Entry
HZ995_13900 CDS
T07138
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
cact
Cognatishimia activa
Pathway
cact03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cact00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HZ995_13900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cact03019
]
HZ995_13900
Enzymes [BR:
cact01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HZ995_13900
Messenger RNA biogenesis [BR:
cact03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HZ995_13900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HEM4
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QTN35557
UniProt:
A0A975EPL9
LinkDB
All DBs
Position
2817478..2819061
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AA seq
527 aa
AA seq
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MAHFDELGLPKRLVDRLAEKGLTEPTPIQNRAIPHALNGQDVMGLAQTGTGKTLAFGLPL
IAKLSDYGTKPAPKTLRALVLAPTRELANQIAASLKEMVEGTPFKVGIVVGGVAINPQIK
RVERGTDVIIATPGRLIDLMERNALDFEDTDFLVLDEADQMLDLGFIHALRRIADVLPFE
RQTMLFSATMPKQMNEIAQTYLKNPIRIQVSPPGKAADKIDQSIHFIAKAEKTNLLKELL
ADHMGEASIVFSRTKHGAERLKKSLEASGFTATSVHGNKSQGQRERAIKEFREGHAMVLV
ATDVAARGLDIPHVRHVYNYDLPNVPDNYVHRIGRTARAGMDGKAVAFCAPDEIDQLKDI
QKTMKFTIPVASGRPWMGLEEQGGKGKSKGGPRRGKPGGRGRGQGRSAPDSDFGPDLDVT
VFDKPSGGKPRRGKGQGGKPNRSGDSKPQGRFSDDARVESSDKPKSKRVWKSDGKPSGKP
KGHSGGGRDDKPRGGKPQGKPGGKFRGKPSGKRSGQGGSEPPRRRSR
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcacattttgatgagcttggcttgcccaagcgcttggtcgaccgtttggctgaaaag
ggtctgaccgaaccaaccccaatccagaaccgcgcaattccgcatgctttgaacgggcag
gacgtgatggggctggcgcaaaccggcaccggtaaaacgctggcctttggcctgccgctg
attgcgaaattgtcggattatggcacgaaacctgcgccaaagaccctgcgagctttggtt
ctcgcgccaacacgcgagctggcgaaccagattgctgcgtccttgaaagagatggtcgaa
ggcacgccgtttaaagtgggtatcgtggtcggcggcgtcgccatcaaccctcagatcaaa
cgggtcgagcgaggcactgatgtgatcatcgccactccgggccgtctgatcgacctgatg
gaacgcaacgcgctggattttgaggacaccgatttccttgttttggacgaagcggatcag
atgctcgatctgggtttcatccacgctttgcgccgcattgccgacgtgttgccgttcgaa
cgtcagaccatgctgttctcggccaccatgcccaagcagatgaatgagatcgcgcagacc
tatcttaagaacccgatccgcattcaggtttcacctccgggcaaggcagcggacaagatc
gaccaaagcattcacttcattgcaaaggccgaaaagaccaatctgctgaaagagcttttg
gccgaccacatgggcgaggcctcaatcgtgttttctcgtacgaaacacggtgcggaacgt
ctgaagaagtccttggaagcctctggtttcacagcaacttccgtccatggcaacaaaagc
cagggtcagcgcgaacgcgcgattaaagagttccgtgaaggtcatgcgatggtgcttgtc
gccaccgatgttgcggcgcggggattagacattcctcatgtgcgtcacgtctacaattac
gacctgcccaatgtgcctgacaactatgtgcaccgcatcggccgcaccgcgcgcgcaggt
atggacggcaaggccgtcgccttctgcgcgccggacgagatcgatcaactgaaagacatc
caaaagaccatgaagttcacgatccctgtggcctccggtcgaccgtggatggggctcgaa
gagcaaggcggtaagggcaaatccaaaggcgggccgcgtcgcggcaagccgggtggacgt
ggccgcggccaaggtcggtctgcgcctgatagcgattttggacctgatctggacgtgacg
gtgtttgataaaccgtctggcggaaagcctcggcgcggcaaggggcagggcgggaaaccg
aaccgttcgggcgacagcaagccgcaagggcgtttttcagacgacgcacgggtagaaagc
tctgacaagcccaaaagcaagcgggtttggaaaagtgacgggaaaccttcgggcaaacca
aaagggcattctgggggcggacgcgatgacaagccgcgcggcggcaaacctcagggtaaa
cccggtggcaagttccgaggcaagccgtcaggcaaacgcagcgggcaaggcgggtccgag
ccgccgcgtcgtcgctcgcgttaa
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