Gottschalkia acidurici: Curi_c02360
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Entry
Curi_c02360 CDS
T02255
Symbol
recD
Name
(GenBank) RecD/TraA family helicase RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cad
Gottschalkia acidurici
Pathway
cad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Curi_c02360 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cad03400
]
Curi_c02360 (recD)
Enzymes [BR:
cad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Curi_c02360 (recD)
DNA repair and recombination proteins [BR:
cad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Curi_c02360 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
AAA_22
PIF1
T2SSE
UvrD-helicase
HHH
nSTAND3
Helicase_RecD
HHH_2
NPHP3_N
HHH_3
Herpes_Helicase
DNA_pol_lambd_f
AAA
SLFN-g3_helicase
AAA_28
NTPase_1
RsgA_GTPase
ABC_tran
RecR_HhH
AAA_16
5_3_exonuc
KTI12
AAA_14
TrwB_AAD_bind
FtsK_SpoIIIE
AAA_29
MobB
HI0933_like
DEAD
ResIII
UvrD_C
cobW
Motif
Other DBs
NCBI-ProteinID:
AFS77316
UniProt:
K0AY55
LinkDB
All DBs
Position
243391..245616
Genome browser
AA seq
741 aa
AA seq
DB search
MITLQGDIEEIIFHNEDNGYTVAILGTEDDVVTIVGNIPLIRDGESLKVHGTIINHPTYG
EQLKVEAYELIAPATINGIIKYLSSGLIPGIGPKTAERIVERFGTDSLDILQYNPNRLKE
IEGIGDKKLEKIVASFEEQRELKDIMVFLQQYDITPALGIKIYKKYGTETIEKVQENPYR
LSEEIIGIGFKLADKIAKSMGVEPNSSYRISAGIKFCLTGFASEGHTYAPRQELIHKCSR
LLEVDNTLVEEGLMDLALRQEVQLENFDDEICVYYMPYYYAETNVSKKIIELSQSEIKKL
EVNIENEIEELESENNISLADNQKEAIRQSVENGLLVITGGPGTGKTTTINTIIQLFESQ
DLKIHLAAPTGRAAKRMSEATGREAKTIHRLLEYGFVDESIGMIFSKDEGTPLETDVIII
DEMSMVDILLMNNLLKAIMPGTRVILVGDTDQLPSVGAGNVLKDIIESKIVKVVKLDEIF
RQAQESMIIVNAHKINKGEHPKLNVKDKDFFFLNGQKPEVVVKTVIDLAKERLPKYNGYD
PIKDIQILSCSRKGDVGVNILNDKLQEALNPKARYKSERKIGDQILRVGDKIMQIKNNYN
TKWKLLEGDRITQEGEGVFNGDFGLITDIDEEENELVVLFDDNREVIYNFSQLDEIRLAY
ATTVHKSQGSEFPVVIMPIYWGPPMLLMRNLLYTAITRAKELVVLVGDQKCLGYMINNNK
ITKRYSGLNKRLFKVFEYLMR
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
gtgataacactacagggagatatagaagaaataatatttcataatgaggataatggatac
actgtagccatattaggaacagaagatgatgtagtaactatagtaggaaatatcccttta
atcagagacggagaatcattgaaagtacatggaacaataataaatcaccctacatacgga
gaacagctaaaagtagaagcatatgagctaatagcaccagctacaattaatggaataata
aaatatttatcatcaggtttaataccgggaataggtcctaaaacggcagaaagaatagta
gaaagatttggaacagattcactggacatacttcagtataatcctaataggttaaaagaa
atagagggaatcggggacaaaaagttagaaaagatagtggcatcatttgaagaacaaaga
gaattaaaagatataatggtatttttacaacagtatgatataactccagcattaggaata
aagatatataaaaagtatggtacggagaccatagaaaaagttcaggaaaatccttataga
ttatcagaagaaataataggaataggatttaagttagcagataaaatagcaaaaagcatg
ggtgttgaaccaaactctagttatagaataagtgcgggaattaaattttgtttaactgga
tttgcatcagaaggccatacatatgcaccaaggcaagaactaatacataaatgttcaaga
ttactggaagtagataatacattagttgaagaaggacttatggatttagcattaaggcaa
gaagtacaattagaaaactttgatgatgaaatatgcgtgtactatatgccatactattac
gcagagactaatgtaagcaaaaagataatagaattatcacaaagtgaaataaaaaagtta
gaagtaaatatagaaaatgaaatagaagaactagagagcgaaaataatataagtttagca
gataatcaaaaagaagctattagacaatcagtagaaaacggattattagtaataacagga
ggacctggaacaggtaagaccacgactataaatacaataatacagctatttgaaagtcag
gatttaaaaatacatttagcggcaccaacaggaagagcagctaagagaatgagcgaggct
actggaagagaagctaaaacaatacataggctattagagtatggatttgtggacgagagt
attgggatgatattttcaaaggacgagggaactccgctagaaacagatgtgataataata
gatgaaatgtcaatggtagatatattacttatgaacaatttattaaaggcaattatgcca
ggaactagagtaatattagtgggagatacagatcagttaccatcagtaggagcaggaaat
gtactaaaagatataatagaaagtaaaatagtaaaagtagtaaagttagatgagatcttt
agacaagcacaggaaagcatgataatagtgaatgcacataagataaataagggagaacat
cctaagttgaatgtaaaagataaggacttcttctttctaaatggacaaaaaccggaggtt
gtagtaaaaacggtaatagatttagcgaaggagagacttcctaaatataatggatatgac
ccaataaaagatatacagatactttcatgtagtagaaaaggcgacgtaggggttaatata
ctaaacgataaactacaagaggcattgaatccaaaagcaaggtataaaagtgagagaaaa
ataggtgaccagatactaagagtcggagataagataatgcagataaaaaataactataat
acaaagtggaagttattagagggggataggatcacacaagaaggagaaggcgtatttaat
ggagattttggattaataacagatatagatgaagaagaaaatgaattagtagtattattt
gatgataacagagaagtaatatataattttagtcaattagatgagataagattagcgtat
gcaaccacagttcacaaaagtcaaggtagtgaatttccagtcgtaataatgccaatatat
tggggaccaccaatgctattaatgagaaatctattatatacagcaataactagagcaaag
gaactagtagttttagtgggagatcaaaaatgtttggggtatatgataaataataataaa
ataactaagagatattcagggctcaataagaggttgtttaaagtttttgagtatttaatg
aggtga
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