Gottschalkia acidurici: Curi_c22350
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Entry
Curi_c22350 CDS
T02255
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cad
Gottschalkia acidurici
Pathway
cad03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cad00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Curi_c22350 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cad03021
]
Curi_c22350 (rpoA)
03400 DNA repair and recombination proteins [BR:
cad03400
]
Curi_c22350 (rpoA)
Enzymes [BR:
cad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Curi_c22350 (rpoA)
Transcription machinery [BR:
cad03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Curi_c22350 (rpoA)
DNA repair and recombination proteins [BR:
cad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Curi_c22350 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
DtxR
Motif
Other DBs
NCBI-ProteinID:
AFS79238
UniProt:
K0AZL2
LinkDB
All DBs
Position
complement(2360065..2361012)
Genome browser
AA seq
315 aa
AA seq
DB search
MIEIEKPKIEIVEINEDNTYGKFIVEPLERGYGTTLGNSLRRILLSSLPGVAVSSIKIQG
VLHEFSTVPGVLEDVSEIILNIKELAAVMHTDEPVILKIDAEGPGVIKAGDIDTGSEVEI
LNKDLHIATLEDDAKLYMELEMVKGRGYVPAERNKKENQIIGVLPVDSIFTPVKKVNFTV
EDTRVGQVTDYDKLILEIWTNGTIKPDEATSLGSKILSEHLNLFITLTDHVSEVEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVDELAQKSEEDMMKVRNLGKKSLEEVQ
NKLAELDLGLRNNEE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaattgaaaagccaaaaatagaaattgtagagattaatgaagacaatacctat
ggaaaatttattgtcgagcctttagagagaggttacggaactacactaggtaactcactg
agaagaattttactatcttcactaccaggagtagctgtttcttcaataaagattcaaggt
gttttacatgaattctcaacagtacctggtgttttagaagatgtttcagaaataattctt
aatataaaagaattagctgcagttatgcacactgatgaacctgttattcttaaaatagat
gcagagggaccaggcgttataaaagcaggagacattgatacgggttcggaagtggagata
ttaaataaagatcttcacatagcgactcttgaagatgatgcgaaactatatatggaactt
gaaatggtaaaaggaagaggctatgtgccagctgagagaaataaaaaagagaatcaaatc
ataggtgttcttcctgtcgactcaatatttactcctgtaaagaaagtaaactttactgta
gaagatactagagttggtcaagtaacagattacgataaacttatattagaaatttggact
aatgggactataaagccagatgaagctacttctttaggatctaaaatattaagtgaacac
ttaaacttattcataactttaactgaccatgtaagtgaagtagagataatggtagaaaaa
gaagaggataagaaagagaaagttcttgaaatgactatagaagagttagatttatctgtt
agatcttacaactgtctaaaaagagcaggaatcaacactgttgatgaattagctcagaag
tcagaagaagatatgatgaaggttagaaaccttggtaagaaatcccttgaagaggttcaa
aacaaacttgctgaactagacttaggcttaagaaataatgaagagtaa
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