Gottschalkia acidurici: Curi_c23310
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Entry
Curi_c23310 CDS
T02255
Symbol
cshA2
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cad
Gottschalkia acidurici
Pathway
cad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Curi_c23310 (cshA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cad03019
]
Curi_c23310 (cshA2)
03009 Ribosome biogenesis [BR:
cad03009
]
Curi_c23310 (cshA2)
Enzymes [BR:
cad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Curi_c23310 (cshA2)
Messenger RNA biogenesis [BR:
cad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Curi_c23310 (cshA2)
Ribosome biogenesis [BR:
cad03009
]
Prokaryotic type
rRNA helicases
Curi_c23310 (cshA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AFS79333
UniProt:
K0AZW0
LinkDB
All DBs
Position
complement(2441517..2442857)
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AA seq
446 aa
AA seq
DB search
MTINFRELSIDKNLENALEKEGIINPTPIQIKSIPEILNGKDIIAQAQTGTGKTLAFILP
IIEKLDTSKPYIQALIVTPTRELAIQITDEAKKLSYVNEMNILSVYGGQDVERQIRKLKD
GVHLVVGTPGRILDHLRRGTINFNQLRMLVLDEADQMLHMGFLNEIEDIISQTPKERQTT
LFSATMPRDIKKIAKRYMKEPKIISVEAKNITLDEIDQIVIETTDRGKQEAICTMIDEYN
PFLAIIFCRTKRRAKALNELLIKRGYNSDELHGDLSQAKRERVMKNFREAKIQLLVATDV
AARGIDIEGITHVFNYDIPEDPESYIHRIGRTGRAGQTGIAITFVTPKNSQELSDIEKQI
KMNIKRQKFDKKHENKFETVVSKSREKTDKSYKNQKDSERTRFGQNKKHLEVIDLVVKLN
EDMKKKEKTKEVKILKISIDKMRNNL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgacaataaactttagagaacttagcattgataaaaatttagaaaatgcattagaaaaa
gaggggataataaatccaacccctattcaaataaagtctattccagaaatattaaatgga
aaagatataatagctcaagctcaaacgggaacaggaaaaacacttgcatttattttacct
attattgaaaaactagatactagtaaaccttatatacaagcactaatagtaacacctaca
agagagttagccattcaaattacagatgaagccaaaaaactttcttatgtaaatgaaatg
aatatattatcagtatatggtggtcaagatgtagaaagacagataagaaaattaaaagat
ggagtacatctagtagttggtactccaggtagaatacttgatcatttaagacgaggaact
ataaactttaatcaattaagaatgcttgtactagatgaagctgatcaaatgcttcatatg
ggattcttaaatgaaatagaagatataatcagtcagacacccaaagagcgccaaacaacg
ttattctcagctactatgccaagagatattaaaaaaatagcaaaaagatatatgaaagaa
cctaaaattatatctgttgaggcaaagaatataactctagacgaaatagatcagatagta
attgaaaccacagatagaggaaagcaagaggctatttgcacaatgatagacgaatataat
cctttcttagctataatattctgtcgtactaagcgtagagcaaaagcgttaaatgagcta
ttgataaagcgaggatataattcagatgaacttcatggcgatttaagtcaagcaaaacga
gaaagagtaatgaaaaactttagagaagcaaagatacagctattagtagcaacagatgtt
gcagctcgaggaatagatatagaaggaataactcatgtatttaactatgatataccagaa
gatcctgaaagctatatacatcgtataggaagaacgggtagagcagggcaaactggtata
gcaataacatttgtgactcctaaaaattcacaagagttaagtgatattgaaaaacaaata
aaaatgaatataaagagacaaaaatttgataaaaaacatgaaaataaattcgaaactgta
gtaagtaaatcaagagaaaaaactgataaatcttataaaaatcaaaaggatagtgaaaga
actagatttggacaaaataaaaaacatctagaagtaatagatttagtagtgaagctaaac
gaagatatgaagaaaaaggaaaaaacaaaagaagtaaaaatactaaaaataagtattgat
aaaatgagaaataatctataa
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