Gottschalkia acidurici: Curi_c26130
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Entry
Curi_c26130 CDS
T02255
Symbol
cshA3
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cad
Gottschalkia acidurici
Pathway
cad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Curi_c26130 (cshA3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cad03019
]
Curi_c26130 (cshA3)
03009 Ribosome biogenesis [BR:
cad03009
]
Curi_c26130 (cshA3)
Enzymes [BR:
cad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Curi_c26130 (cshA3)
Messenger RNA biogenesis [BR:
cad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Curi_c26130 (cshA3)
Ribosome biogenesis [BR:
cad03009
]
Prokaryotic type
rRNA helicases
Curi_c26130 (cshA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrD-helicase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFS79608
UniProt:
K0B0Q5
LinkDB
All DBs
Position
complement(2737208..2738788)
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AA seq
526 aa
AA seq
DB search
MSDVKFKDLGLNEDILKAINELGFEEPSKIQKEAIPVVLEGFDVIGQAQTGTGKTLAFGA
PVINKIKKSTGKISSIVITPTRELAIQVNDEISRIGKYTRVRTLPVYGGKPIDRQIRAIK
QGVDVLVGTPGRVLDLIRRRVVDLSRVNFLVLDEADEMLDMGFIDDIEEIIRNCPEDRQT
MLFSATMPPQIKRLAKSYMKEDMKHISIVKNTITVSTVSQYYFEIKQNNRFESLCRILDY
DEPSSAIIFCKTKKGVDELVEGLQVRGYNVEGMHGDMTQDHRMNTLRKFKEGNLEFLVAT
DVAARGIDIESITHVFNYELPQDSDSYVHRIGRTGRANRQGTAYTLVTAREYRFLKQIEK
DTKGTIKRKELPTIDDIFLSKYKSIVGRVKETLSQDDYKRFVPLVTELDEEYSLVDVASA
LMYMVYTKEISYEYTENSISSNEGGFVRVFLNVGRKDKLNPKKLITFIKESARIRGDEIG
DIDILDKFSFFDISQKAVDKVFKTCEGKRFCGRKVNLEIAKKNSLI
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgtgaaatttaaggatttaggacttaatgaagatatacttaaagcaataaat
gaattaggctttgaggaaccttcaaaaattcagaaagaagctataccagtagtattagaa
ggatttgacgttataggtcaagcgcaaactggaacaggaaaaacacttgcatttggagct
ccagttataaataagataaaaaagtctacaggtaagataagtagtatcgttataacacct
acaagagagttagcaatacaagtaaacgatgaaataagccgtataggaaaatatactaga
gtaagaacacttccggtttatggtggaaagcctatagatagacaaataagagctattaaa
caaggtgtagacgttttagtaggtacgccaggtagagttctagatcttataagaagaaga
gtagtagatttaagtcgagttaattttctagtattagatgaagcagatgaaatgcttgat
atgggattcatagatgatatagaagaaataataagaaactgtccagaagacagacaaaca
atgttattctctgcaactatgcctccgcaaattaaaagactagctaaaagctatatgaaa
gaagatatgaaacatatatctatagtaaaaaatacaattacagtatctacagttagccaa
tattattttgaaataaaacaaaataatagattcgaatcattatgtagaatattagattat
gatgagccaagttcagccataatattctgtaaaactaaaaagggcgtagatgagttagta
gaaggattacaggtaagaggatataatgtagaaggtatgcatggagatatgactcaggat
catagaatgaatactttaagaaagtttaaagaaggaaatctagagtttttagtagcaaca
gatgtagcagcaagaggaatcgatatagaaagtataacacacgtatttaactatgaatta
cctcaagattcagattcatacgttcatagaatcggaagaactggaagagctaatagacaa
ggtacagcttatactttagttacagcaagagaatatagattcttaaaacaaattgagaaa
gatactaaaggaacaataaaaagaaaagaattaccaactatagacgatatattcttatct
aagtataaaagtatagtaggtagagtaaaggaaactttaagtcaagacgattacaagaga
tttgtacctctagtgacagagctagatgaagaatatagtcttgtagatgtagcttcagct
ttaatgtatatggtttatactaaagaaataagttatgaatacacagaaaactctatatca
tcaaatgagggtggatttgtaagagtattcttaaatgtaggacgtaaagataaattaaat
cctaaaaagttaattacttttattaaagagagtgcaagaataagaggcgatgaaatagga
gatatagatatcctagataaattctcattctttgatatatcacaaaaagctgttgacaaa
gtgttcaagacttgtgaaggcaaaagattctgtggaagaaaagttaacttagaaatagct
aagaaaaatagtttaatataa
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