Clostridium acetobutylicum DSM 1731: SMB_G0227
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Entry
SMB_G0227 CDS
T01548
Symbol
exoA
Name
(GenBank) exodeoxyribonuclease (exoA)
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cae
Clostridium acetobutylicum DSM 1731
Pathway
cae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SMB_G0227 (exoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cae03400
]
SMB_G0227 (exoA)
Enzymes [BR:
cae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SMB_G0227 (exoA)
DNA repair and recombination proteins [BR:
cae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SMB_G0227 (exoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AEI33437
LinkDB
All DBs
Position
246600..247352
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AA seq
250 aa
AA seq
DB search
MKLISWNVNGLRACITKGFLDYFKEVDADVFCLQETKIQEGQVELELPGYYDFWNYAEKK
GYSGTAIFTKKKPISYSYGINEEKHDKEGRVITLEFEDFYMVTVYTPNSKEKLARLEYRM
EWEDSFRNYLKALDEKKPVIVCGDMNVAHTEIDLKNPKTNTKNAGFSPEERSKFTELLEA
GFIDTYRYFYPDKEGIYSWWSYRFKAREKNAGWRIDYFCTSERLKDKLVSADIHTEVMGS
DHCPVELVIK
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaatttcgtggaatgtaaatggcttaagagcttgtataacaaaaggtttctta
gattactttaaagaagtggatgcagatgtattttgtcttcaagaaactaaaattcaagaa
gggcaagttgagctagagctgcctggatattatgatttttggaattatgctgagaaaaaa
gggtactccggtactgctatattcactaagaaaaagcctataagctatagttatggaata
aatgaagagaaacacgataaggaaggaagagttataacacttgaatttgaggatttctat
atggttactgtttacactccaaattctaaagaaaagttagcaagactggaatatagaatg
gagtgggaggatagttttagaaattacctcaaagcattggacgaaaagaaaccagttatt
gtttgtggtgatatgaatgttgctcatacagaaatagatcttaagaatccaaaaacaaat
acaaaaaatgccggttttagtccagaggaaaggagtaaattcacagagcttttagaagct
ggatttatagacacatatagatacttttatccagataaagaagggatttattcttggtgg
tcatatagatttaaagctagagaaaagaatgccggatggcgtatagattatttttgtact
tcagaaagattgaaagataagcttgtaagtgctgatattcatactgaggttatgggatca
gaccattgtcctgttgagcttgttataaaatag
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