Clostridium acetobutylicum DSM 1731: SMB_G0512
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Entry
SMB_G0512 CDS
T01548
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
cae
Clostridium acetobutylicum DSM 1731
Pathway
cae03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SMB_G0512 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cae03400
]
SMB_G0512 (uvrB)
DNA repair and recombination proteins [BR:
cae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SMB_G0512 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SMB_G0512 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_30
SWI2_SNF2
PH_GAC
AAA_22
ApoLp-III
DUF87
Phage_Mu_Gp48
Adenylsucc_synt
DUF4423
Motif
Other DBs
NCBI-ProteinID:
AEI33269
LinkDB
All DBs
Position
575246..577246
Genome browser
AA seq
666 aa
AA seq
DB search
MGTFKINSAFKPTGDQPQAIASIVNGIKNNNKWQTLLGVTGSGKTFTMANIIEKVQKPTL
VIAHNKTLAAQLCSEFRDFFPDSSVEYFVSYYDYYQPEAYVAQTDTYIEKDASINDEIDK
LRHSATSALFERRDVIVVASVSCIYGLGNPEEYKKLSISLRTGMNKDRDEILEKLVEMQY
ERNEINFVRGTFKVKGDTIDIFPAGSTSSAIRVELFGDEIDKIKEFDVLTGNTIKTLKHT
VIFPASHFATSSDKIEEAIKQIEIELEERLRELNSEDKLLEAQRLKQRTNFDIEMMREVG
YCTGIENYSRIMDGRQKGEPPKTLIDYFPDDFLMFIDESHVTLPQVKAMYGGDRSRKNSL
VDYGFRLPSAYDNRPLKFDEFEEKINQIVFVSATPSNYELDHSENIAEQVIRPTGLLDPE
IEVRPTKGQIDDLYSEIKNTIQNGFRILVTTLTKKMAEDLTDYLKDLGIKTTYMHSDIDT
LERMKIIKDVRTGEFDVLVGINLLREGLDIPEVALVAILDADKEGFLRSERSLIQTIGRA
ARNSESRVIMYGDKITDAMGKAISETKRRRKIQIEYNEKNGIKPTTIKKAVRDVIGISEV
AEGKTEYKSMDEAVKADNKNIDKLIKEFEKEMKEAAKELQFEKAAYFRDKVNELKKKLNE
NEEVIK
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgggcacatttaaaataaattcagcgtttaagcctactggtgaccaaccacaggctata
gcaagcatagttaatggaataaaaaataataataagtggcaaacacttttaggagttact
ggatcaggaaagacttttactatggcaaatataatagaaaaggttcaaaagccaacacta
gtaattgcacataataaaactttagcagctcagttatgttcagaatttagagattttttt
ccggatagttctgttgaatatttcgtatcttactatgattattatcaaccagaagcatat
gttgcacaaacagatacttatatagaaaaagatgcttctataaatgatgaaatagataaa
ttaaggcattctgctacctcagctctttttgagagaagagatgtaattgttgtagcatcg
gtttcttgtatatatggattaggtaatccagaggaatacaaaaaactttctatatcactt
aggacaggaatgaataaagatagagatgagattctagaaaagctggttgaaatgcaatat
gaaagaaatgaaataaattttgttagaggtacctttaaagtcaaaggtgacaccatagat
atatttccagcaggatcaacaagcagtgctataagggtagagctatttggtgatgaaata
gataaaataaaagaatttgacgttcttacaggaaatacaataaaaacattaaagcataca
gttatttttccagcatctcactttgcaacttcaagtgataaaattgaagaagcgataaag
caaattgagattgaactagaggaaagacttagagagcttaattcggaggataaacttctt
gaagctcaaaggttaaagcaaaggactaactttgatattgaaatgatgagagaagttgga
tattgtactggaatagaaaactattctaggataatggatggaaggcaaaaaggagaacca
cctaaaacccttattgattacttcccagatgattttcttatgtttatagatgaaagccat
gtaactcttccgcaggtaaaagcaatgtatggaggagatagatctcgaaaaaattcttta
gttgattatggttttagattgccaagtgcttatgacaacagacctcttaaatttgatgaa
tttgaagaaaaaataaatcagattgtatttgtaagtgctaccccttcaaactatgaactg
gatcattcagaaaatatagcagagcaggttataagaccaacgggactccttgatccagaa
atagaggtaaggcctactaagggtcaaattgatgatctttattcagaaataaagaacaca
attcaaaatggttttagaattttggttactactcttacaaagaaaatggcagaggattta
acagattatcttaaggatttaggaataaaaactacctatatgcattctgacatagataca
ttggagagaatgaagataataaaagacgtaagaacaggagaatttgatgttttagttgga
ataaatcttttaagagagggacttgatattcctgaagttgcactagtggcaatacttgat
gcagataaagaaggattcttaaggtcagaaagatctcttattcaaacaattggaagggcg
gctagaaattccgaaagcagagtaataatgtatggagataaaataaccgatgctatggga
aaggcaataagtgaaacaaaaagaagaagaaaaatacagatagaatacaatgaaaagaat
ggaataaagcctactacaattaaaaaagcagtaagagatgttataggtataagtgaagta
gcagagggaaaaacagaatataagagtatggatgaggcagtaaaagctgataataagaat
atagataaattaataaaagaatttgaaaaggaaatgaaagaggctgctaaagaacttcaa
tttgagaaagcagcgtactttagagataaagtaaatgagcttaagaaaaaattaaatgaa
aacgaagaggtaataaaataa
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