Clostridium acetobutylicum DSM 1731: SMB_G0526
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Entry
SMB_G0526 CDS
T01548
Symbol
dnaE
Name
(GenBank) DNA polymerase III DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cae
Clostridium acetobutylicum DSM 1731
Pathway
cae03030
DNA replication
cae03430
Mismatch repair
cae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SMB_G0526 (dnaE)
03430 Mismatch repair
SMB_G0526 (dnaE)
03440 Homologous recombination
SMB_G0526 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cae03032
]
SMB_G0526 (dnaE)
03400 DNA repair and recombination proteins [BR:
cae03400
]
SMB_G0526 (dnaE)
Enzymes [BR:
cae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SMB_G0526 (dnaE)
DNA replication proteins [BR:
cae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SMB_G0526 (dnaE)
DNA repair and recombination proteins [BR:
cae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SMB_G0526 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
DUF6282
Motif
Other DBs
NCBI-ProteinID:
AEI34663
LinkDB
All DBs
Position
592452..595955
Genome browser
AA seq
1167 aa
AA seq
DB search
MITLEAEFKDFVHLHVHTEYSLLDGSGKVKKLVERAKELGMKSIAITDHGAMYGCVEFYK
AAKEVGIKPIIGCEIYVAGKSMHIKHPDAENETYHLVLLVKNEIGYKNLMEIVSTASIEG
FYYKPRVDHEYLMSHSEGLIASSACFGGEVQSYILKDNLEKAKKAALFYKETFKDGFYLE
LQYHALKDDMKVNDTLVNMSKELDIPLIATNDVHYINKEDSIAHDILLCIQTGKTIDEEN
RMRYAPEQFYLKSQEEMYEQFSYVKEALLNTSKIADECNFEYKFHESKLPNFPLPEGEDH
YEYLKKLCYEGLNERYNPITDTIKERLEYELGIIKEMGYVDYFLIVWDFIKFARENGVPT
GPGRGSAAGSIVAYTLGITKIDPIKYSLIFERFLNPDRVSMPDIDSDFCYENRQKVIDYV
VEKYGKDCVSQIVTFGTMAARLCIRDVGRAMNYSYGEVDKIAKMIPNVLNINIDKALEMN
PELKAIYDDDDRIKDLIDISRKLEGLPRHTSTHAAGVVISSQPLVNYVPLLKNEESIVAQ
FTMGILEELGLLKMDFLGLRTLTVINDTIKMVKQNRNIDIDIDDIDFDDYGVYKMIGEGK
TVGVFQLESAGMTSFMKELKPDSLEDIIAGISLYRPGPMNEIPRYIRNKNNPEEIKYVTP
ELKHILDVTYGCIIYQEQVMQIVRDLAGYSMGRSDLVRRAMSKKKHHVMEEERHNFIHGV
VDENGNVEVPGCIKNGISEKIANEIFDSMMDFASYAFNKSHAAAYAVVAYETAYLIHYYP
AEYLAAMLNSVMGNSEKVAFYIRCAEELKIQVLPPDINGSYSRFTVKEDTIRFGLAAIKN
VGFNVIESIVRARNEKGNFISFTDFCNKIDTSEVNKRAVESIIKSGGFDTLGVYRSKLLA
VFEKIMDGISGQRKKNIKGQMNLFTDFVQDDYEEVEIQYPDIKEFDKKYLLAMEKEMTGL
YLSGHPLEDYEETLKNMTSIKISDIVAPQSLEDNDGVKLDENTDVQDGTRVIIGGIVTSV
TKKVTRSNTMMAFIKLEDMYAAIEVVIFPKILEKNASYINEDEMVIIKGRINKREDEQPK
VICEEISPIIKNTEKIYVLVEDDTAVKTSLKEIRKMLLLYNGDTPIYMCTKKDRKKFLID
KALWVQKEVEVIKFLTDKFGENNVKVI
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgattacattggaggctgaatttaaagattttgttcatcttcatgtccataccgaatac
agtctccttgatggttctggtaaggtcaagaaattagttgaacgagctaaagagcttggc
atgaagagtattgcaataacagatcacggtgcaatgtatggatgtgtagagttttataag
gcagcaaaggaagttggtataaaacctataatcggatgtgaaatctatgtagcaggaaaa
tctatgcatataaaacatcctgatgctgaaaatgaaacatatcatctagttttactagtg
aaaaatgagattggatataagaacttaatggaaatagtttcaacagcttcaatagagggc
ttttactataagcctagagttgatcatgaatatctaatgagtcatagtgaaggacttata
gcttcaagcgcatgttttggaggagaggttcaatcttatatattaaaagataatcttgag
aaggcaaagaaagctgcacttttttataaagaaacctttaaggatggcttttatttagag
ttgcaatatcatgcacttaaggatgatatgaaggttaatgataccttggtaaatatgtct
aaagaacttgatataccgcttatagcgactaacgatgttcattacataaataaagaggac
tctattgcacatgatatacttctttgtatacagacaggtaagactatcgatgaagaaaat
agaatgaggtatgctcctgagcaattttatcttaaaagtcaagaagaaatgtatgaacag
ttttcttatgttaaggaagctttattaaatacatctaaaatagccgatgaatgtaatttt
gaatataagtttcatgagtcaaagctccctaattttcctcttccagagggtgaggaccac
tacgaatacttaaaaaagttatgctatgaaggtttaaatgaaagatataacccaattaca
gataccattaaggaaagacttgagtatgaacttggaataataaaagaaatggggtatgta
gactattttttgatagtttgggattttattaagtttgcaagagaaaatggtgtgccaaca
ggaccaggcagggggtcagcggcaggatcaattgtagcatatacacttggaataaccaaa
attgacccaattaagtacagtctgatttttgaaagatttctaaacccagatagagtttcc
atgcctgatatagatagtgatttttgttatgaaaatcgtcaaaaggtaatagattatgtt
gtggagaagtatggaaaggattgtgtgtcccaaattgtaacctttggaactatggcagca
agattgtgtataagagacgttggaagagctatgaattattcctacggtgaggttgataaa
atagctaagatgattccaaatgttcttaacataaatatagataaggcacttgaaatgaat
ccagaactcaaggctatttatgatgacgatgatagaataaaggatttaatagatatatca
agaaagcttgaaggacttccgagacatacgtctactcatgcagctggagttgttatatcc
tctcagcctcttgtaaattatgtaccgcttttaaaaaatgaagaatccatagtagctcaa
tttactatgggaattcttgaagagcttggacttcttaagatggactttttaggactaaga
accttaacggttataaatgacactataaaaatggtaaaacaaaatagaaatattgatata
gatattgatgatatagactttgatgattatggtgtttacaagatgataggtgaagggaaa
acagtaggagtatttcagctagaatctgctggtatgactagttttatgaaggagttaaaa
ccagatagtttagaggatataatagcaggaataagtctctacagaccaggtcctatgaat
gaaataccaagatatataagaaataaaaataatccagaagaaataaaatacgttactcca
gaacttaaacatattttagatgtcacctatggctgtataatatatcaagagcaggtaatg
caaatagtaagagatttagcaggatattcaatgggaagaagtgaccttgtaagacgtgct
atgtctaagaaaaagcatcatgttatggaagaagaaagacataattttatacatggagtt
gttgatgaaaatggcaatgttgaagtgccaggatgtataaaaaatggaatttctgaaaaa
atagctaatgagatatttgattcaatgatggattttgcaagttatgcttttaataaatca
catgcggcagcctatgctgttgtggcatatgaaactgcatacttaattcattattatcca
gcagaatatcttgcagctatgcttaatagtgttatgggtaatagtgaaaaggtagctttt
tatataaggtgtgcagaagagcttaaaattcaagttttacctcctgatataaatggaagc
tattcaaggtttaccgtaaaggaagacactataagattcggtcttgctgctattaaaaat
gtaggttttaatgtaatagagagtatagtaagggctagaaacgaaaagggaaattttatt
tctttcacggatttttgtaataaaattgatacctctgaggtaaacaaaagagcagttgag
agtataataaaatcaggaggatttgatactcttggagtttataggtcaaagcttcttgca
gtttttgaaaagataatggacggaatttcagggcagagaaagaaaaatataaaaggtcaa
atgaatttatttactgactttgtacaagacgattacgaagaagttgaaattcaatatcca
gatataaaggaatttgataaaaaatacttacttgccatggaaaaagaaatgacagggcta
tatctatcaggtcatccacttgaagattatgaagaaactttaaaaaatatgactagtata
aaaatatcagatatagtagcacctcagtctctagaagataatgatggtgtaaagcttgat
gaaaatacagatgttcaagatggtactagagttattataggcggaattgtgacttctgta
actaaaaaggttacaagaagcaatacaatgatggcttttataaagttagaagacatgtat
gcagctatagaagttgttatattccctaaaatcctagaaaaaaatgcctcttacataaat
gaagatgagatggtgataataaagggtaggataaataaaagggaagacgaacagcctaag
gtaatatgtgaagagatatcacctattataaaaaatacagagaagatatatgtgcttgtt
gaagatgatactgctgttaaaacttcattaaaagaaataagaaaaatgctgcttttatat
aatggagacactccaatatatatgtgcacgaagaaggatagaaagaaatttcttattgat
aaagctttatgggttcaaaaggaagttgaggtaattaaatttttaacggataaatttggc
gaaaataatgtaaaagtgatataa
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