Clostridium acetobutylicum DSM 1731: SMB_G1746
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Entry
SMB_G1746 CDS
T01548
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cae
Clostridium acetobutylicum DSM 1731
Pathway
cae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SMB_G1746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cae03400
]
SMB_G1746
Enzymes [BR:
cae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SMB_G1746
DNA repair and recombination proteins [BR:
cae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SMB_G1746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
AAA_11
AAA_7
nSTAND3
TrwB_AAD_bind
T2SSE
Zn_Ribbon_TF
SLFN-g3_helicase
MRP-L20
DUF87
zf-CHY
Fe_dep_repress
Viral_helicase1
SRPRB
UvrD-helicase
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
AEI34425
LinkDB
All DBs
Position
1870929..1873130
Genome browser
AA seq
733 aa
AA seq
DB search
MYNFAGIIINNEVASLDRIFTYEIPEELKESIKVGQLVKVPFGNSNKRLYGFVFDLKLEN
QGKIKLKKIASIESDEPLITDKDMQLIENMKKKYLCTYIECIRLIIPTGIMKGMKPKTTD
VVFLNGSLPDNLKKDKYESIYKIVEQNNGMYNRSQLSKKFNISVSSINTMIKYGALTISE
KVLTRYDSRVYDVYGEKKLNDFQEDAVNTILYSNKRKFLIHGVTGSGKTEIYMHLVKKMI
EDNKQSIILVPEISLTPQMIERFKGRFGLNVAVFHSKLSDGERYDEWIRVKNGEVKVAVG
ARSALFLPFDKLGLIVIDEEHEGSYKSESDPKYNAIEVAEMKSAIEDCILVLGSATPAVE
TYYKTLKEDYDLITLKNRADGALMPEVSVVDMREELRENNKSIFSRALYESILETLERKE
QIILFLNRRGYSTFVSCRKCGYVFKCKNCDVSMTYHNNKGYLICHYCGSTQRIPSVCPKC
GSKYVKYFGAGTERIEREIKRLFPNARTVRMDRDTTVKKDSYERIYNGFKNKEYDILIGT
QMIAKGLDFKDVTLVGVVAADLTLNLPDYRAGERTFQLLCQVSGRAGRGSKKGKVVIQTY
SPESYAIRFSSTNDYRSFFKEEIKLRHDMDYPPFNKLLLLNFSSKNEQLLIKNIQIVGDF
LKNKAKEYSNIYVLGPCPSPISKINEAYRWQIVLKGDITYEVACFIKKSIYELLKKVYNN
IRVSLDINPLSLL
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtgtataattttgcaggcattataataaataatgaagttgcatcacttgatagaattttt
acttatgaaattccagaagaattaaaggaaagcataaaagtaggtcagcttgttaaggta
ccttttggaaactcaaataaaagactttatggttttgtctttgatcttaagcttgaaaat
caaggcaaaattaaattgaagaagatagcatctatagaaagtgatgagcctcttataaca
gataaagatatgcagctaattgaaaatatgaaaaagaagtatttgtgtacctatatcgaa
tgtataaggcttataatacctactggaattatgaagggtatgaagccaaaaacaacagat
gtagtttttttaaacggcagtttgcctgataacctaaaaaaggataagtatgaaagcata
tataaaatagtagaacaaaataatggtatgtataatagaagccaattaagcaagaaattc
aatatttcagtatcctccattaatactatgataaaatatggagcattaactatatcagaa
aaggttttaacaagatatgacagcagggtatatgatgtatatggtgaaaaaaagcttaat
gattttcaagaagatgctgttaatacaatactgtattcgaataaaagaaaatttttaatt
catggtgttactggaagtggaaagacggaaatatacatgcatctagtaaaaaagatgatt
gaggataataagcagtcgattatcttagttcctgaaatttctcttacacctcagatgata
gaaagatttaagggaagatttgggctaaatgttgctgtttttcacagtaagctttcagat
ggagaaagatatgatgaatggattagagtaaaaaatggtgaggttaaggtagctgttgga
gctagatccgcactttttttaccatttgataagttgggtttaattgtaatagatgaagaa
catgaaggcagttacaaatcagaaagtgatcctaagtacaatgcaatagaagttgctgaa
atgaaaagtgcaatagaagattgtattcttgttttgggatcggcaactccggctgtagaa
acctattataaaaccttaaaggaagattatgatctgataacactaaaaaacagggctgat
ggtgctcttatgccagaagtatcagttgttgatatgagagaagaattaagagaaaacaat
aaatctatatttagcagagccttgtatgaaagcattttagagacgcttgagagaaaagaa
caaattatactttttctcaataggagaggatattcaacctttgtttcctgtagaaaatgt
ggttatgtttttaagtgcaaaaattgcgatgtttcaatgacttatcacaataataaggga
tatctgatatgccactactgcggaagcactcaaagaattccttcagtgtgtcctaagtgc
ggtagcaagtatgttaagtattttggagcaggaacagagaggatagaaagagagataaaa
aggctttttccaaatgcaagaactgtaagaatggatagggatactaccgtaaaaaaagat
tcctatgaaagaatatataatggcttcaagaacaaagaatatgatattttgataggtact
caaatgattgctaagggactagattttaaggatgttactttagttggagtagtagctgcg
gatctcaccttgaatttgccagattacagggcaggggaaagaacttttcaactcctgtgt
caggttagtggaagagcaggcagaggcagtaaaaaaggtaaagtagtaattcaaacctat
tcaccggaaagctatgctataagattttcatctacaaacgattatagaagcttttttaaa
gaggaaattaaattaagacatgacatggattatccaccttttaataaactacttcttcta
aattttagttctaaaaatgaacaattgttaataaaaaatatacaaatagttggtgatttt
ttaaaaaataaagcaaaggaatatagtaatatttatgtattaggtccatgcccatcgcca
atatccaaaatcaatgaagcctatagatggcaaattgtattaaaaggcgatataacttat
gaagtagcctgctttataaaaaaatctatttatgaattgttaaaaaaagtttataataat
ataagagtttcattagatataaacccattgagtttattataa
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