Clostridium acetobutylicum DSM 1731: SMB_G1830
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Entry
SMB_G1830 CDS
T01548
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cae
Clostridium acetobutylicum DSM 1731
Brite
KEGG Orthology (KO) [BR:
cae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cae03016
]
SMB_G1830 (truB)
Enzymes [BR:
cae01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SMB_G1830 (truB)
Transfer RNA biogenesis [BR:
cae03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SMB_G1830 (truB)
Prokaryotic type
SMB_G1830 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
UPF0113
Motif
Other DBs
NCBI-ProteinID:
AEI33408
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Position
1955366..1956235
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AA seq
289 aa
AA seq
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MDGILNIFKPIGLTSFDVVRQVKKISKEKKVGHTGTLDPLASGVLPICIGKATKIVDFVM
EGKKIYDAEMKLGEISDTYDREGKILKVNQVTSSENNIVEAIMSFQGEILQVPPMYSALK
VNGIKLYDLARQGIEIERASRKIHIYAIKILSIDIPFVKFRVECSKGTYIRSLCYDIGNK
LGCGALMYNLTRVSSGNFNSSFSIPLEDLNEQNITENIINVDKCLENYDEIAVDEKFEKL
LVNGVKVSDRRLIEKIPDNKTYRVYNMERKFLGLGNLSEEGFKIIKLLT
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggatggaattttaaacatatttaagccaataggactaacatcctttgatgtagtaaga
caagtaaaaaaaatctccaaagaaaaaaaagtagggcatacagggacacttgatccattg
gcatcaggtgttttgcctatttgcattggaaaagctactaaaattgtggattttgtaatg
gaaggtaagaaaatatacgacgcagaaatgaagctcggtgaaataagtgatacttatgat
agagaaggtaagattttaaaagtaaatcaagttacttcaagtgaaaataatatagttgaa
gctattatgagttttcaaggtgaaattcttcaagtccctccaatgtactcagcactaaag
gttaatggtatcaaattatatgatttagccaggcagggaattgaaatagaaagagcttct
agaaaaatacacatatatgcaattaagattttaagtatagatattccttttgttaaattc
cgtgttgagtgctctaaaggaacgtacataagaagtttatgttatgatataggtaacaaa
ctaggatgtggagcattaatgtacaatttaacgcgagtgtcatccggaaatttcaattct
tcattcagcattccattggaagatcttaatgagcaaaatattacggaaaatataattaat
gttgataaatgcctggaaaattacgatgaaatagcagtagatgaaaaattcgaaaaatta
ttggtaaatggcgtaaaagtatcagacagaagattaattgaaaaaattcctgataacaaa
acttatagagtctataatatggaaagaaagtttttaggtcttggaaatttaagtgaagaa
ggatttaaaataattaaattattaacctag
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