Clostridium acetobutylicum DSM 1731: SMB_G1872
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Entry
SMB_G1872 CDS
T01548
Symbol
ispH
Name
(GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
cae
Clostridium acetobutylicum DSM 1731
Pathway
cae00900
Terpenoid backbone biosynthesis
cae01100
Metabolic pathways
cae01110
Biosynthesis of secondary metabolites
cae03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cae00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SMB_G1872 (ispH)
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
SMB_G1872 (ispH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cae03011
]
SMB_G1872 (ispH)
Enzymes [BR:
cae01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
SMB_G1872 (ispH)
Ribosome [BR:
cae03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
SMB_G1872 (ispH)
Bacteria
SMB_G1872 (ispH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
Spt6_S1
S1_2
CsrA
Fe-ADH
DUF1694
Fe-ADH_2
Motif
Other DBs
NCBI-ProteinID:
AEI33552
LinkDB
All DBs
Position
complement(2000235..2002163)
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AA seq
642 aa
AA seq
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MRKVMLAEKAGFCFGVKRAVDMALLTQKEYNKKIYTLGELIHNNDVVDKLKDNNVYPIGI
EDIDNLKENDVILIRSHGISEEIYKILLSKGLTVINATCPFVTKIQEKVKKYNELGYDIV
IVGDKYHPEVIGINGWCDNKAIISKQGENLENITSESKVCIVSQTTEKLENWEKVLKEVK
NRAIEVISFNTICNATSERQKIAKDLSNKVDFMVVIGGKQSSNTTKLYEICKSNCNETIH
VENSGEIPENILKNKNCVIGVTAGASTPDWIIEEAISKMSENQISNETNNEMADAMKFIA
ENEGKIYVGASVTGEIIQVSEKEVFLNINYKRDGVIPKSEIDDDGKDLKELFTVGDKIVA
KIIKLKDADNYVVLSVKELQREQGYKEIKEAFENKTTLNVVVKEDVKGGIIASYKGIRIF
IPASHVELFHVDNLKEYIGKSFDVAIIEYSTKKRQTKIVASRRALLSKEKEKVEETVWNK
LEEGQVVEGEVKRLTDFGAFVEIEGVDGLLHVSEISWGRVEKPADVLKIGDKIKVYVLSV
DKENKKLSLSVKKLTENPWNNVEEKYPVGSVVLGKVVRFADFGAFVELEPGVDGLVHISE
ISHKRIAKPSDALNVGEEIKAKILEVSSEEKKIGLSIREVEE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaggttatgcttgctgaaaaagcgggtttctgctttggggttaagagagctgtt
gatatggcacttttaactcaaaaagaatataataaaaaaatttatactttgggagaatta
attcataataatgatgtagttgataaacttaaggataataatgtatatcctattggaatt
gaagatatagataatctaaaggaaaacgatgttatattaataagatctcatggaatttct
gaagaaatatacaaaatacttttatctaaaggacttacagtaattaatgccacttgtcca
tttgtaactaaaattcaggaaaaagtaaaaaaatataatgaacttggatacgatatagta
attgtaggtgataaatatcaccctgaggttattggcattaatggttggtgtgataataaa
gctataatttcaaagcaaggagaaaatttagagaatattacatctgaatcaaaggtttgc
attgtttctcaaactacggaaaaacttgaaaactgggaaaaggttttaaaggaagttaag
aatagagcaattgaagttatatcttttaatacaatatgtaatgctacatcagagagacaa
aaaattgcaaaggatctttcaaataaagtggacttcatggttgttattggaggaaaacaa
agttcaaatacaactaagctgtacgagatatgtaagtctaattgtaatgaaactattcat
gtagaaaattcaggagaaatacctgagaatatattaaaaaataaaaattgtgtaataggt
gtaacggctggagcttcaacacctgattggattattgaggaggcaattagtaaaatgagt
gaaaatcaaatttcaaatgaaacaaataatgaaatggcagatgcaatgaaattcatagct
gaaaatgaaggtaaaatatatgtaggtgcatcagtaacgggagaaattattcaggtttct
gaaaaagaggtatttttaaatataaactataaaagagatggagtaataccaaaaagcgaa
atagatgatgatggaaaagatttaaaagaattatttacagtcggcgacaaaattgtagcg
aaaatcataaagttaaaggatgcagataactatgtagtattatctgttaaagagcttcaa
agagagcaaggatataaagaaattaaagaagcttttgaaaataaaacaactttaaatgtt
gttgttaaagaggatgtaaaaggcggaataatagcttcttataagggaataagaatattt
attccagcttcacatgtagaattatttcatgtagataatctaaaagaatatataggaaaa
agctttgatgtggcaattatagaatattcaactaagaaaagacaaacaaagatagtagct
tctagaagagcactattaagtaaggaaaaagaaaaagtagaagagactgtttggaacaaa
ttagaggaaggtcaagttgttgagggagaagttaaaagattaactgattttggagctttt
gtagaaattgaaggtgttgatggacttcttcatgtatccgaaatatcttggggaagggtt
gaaaagcctgctgatgttcttaagataggagataagattaaagtatatgttttaagtgta
gataaagaaaacaaaaaattatctctaagtgtaaagaaattaactgagaatccttggaac
aatgttgaggagaaatatcccgttggttctgtagtgcttggaaaagtagttagatttgct
gattttggtgcatttgtagaacttgagccaggagttgatggtttggtgcatatttctgaa
ataagccataaaaggatagcaaaaccatccgatgctcttaatgtaggagaagaaataaaa
gctaagatattagaagtaagctcagaagaaaagaagataggtttaagcataagagaagtt
gaagaataa
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