Clostridium acetobutylicum DSM 1731: SMB_G2163
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Entry
SMB_G2163 CDS
T01548
Symbol
spoVD
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
cae
Clostridium acetobutylicum DSM 1731
Pathway
cae00550
Peptidoglycan biosynthesis
cae01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cae00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SMB_G2163 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cae01011
]
SMB_G2163 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cae01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SMB_G2163 (spoVD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PASTA
PBP_dimer
PBP_dimer_2
PAS_6
Motif
Other DBs
NCBI-ProteinID:
AEI34662
LinkDB
All DBs
Position
complement(2222286..2224475)
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AA seq
729 aa
AA seq
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MPKRILVDKATIRNRIFIVFLILTCVIFLLCYKLFNVMVARSSRYKKMAQEQWTSEVKIS
AKRGRILDRNGEELAISGNVYRVDLDLNTIKNSLAEKKMKMDELADRLSSALDMDKKDVS
KQLNKKFKDGRPMGSAILTRRIDKDKANKVLAINVKGVMVSPDTKRYYPNSDFLSQVIGH
TNSDGDGLTGVELKYNKYLKGKPGVRKAEIDKNSANLPYTISEYSKPLDGRDVVLTIDKN
MQYFAEKYAQEALVNNKAKAVSILIMNPKNGEILAMANKPDYDLNDPWDKSKSYDELQKS
WRNRVVSDAFEPGSIFKVITSSAAMSLGIVHENDKFNCGGSITVAKKTIHCWKRTGHGEE
TFVDILKNSCNVGFAELGERLGAKNLNDYINKFGFGRKTGIDLPGEARGIIRPTNKIGPV
DLATIAFGQSNTVSMVQYMQAFNSVANGGYLITPHVMREISHVENNRQVVDKEYSDYNKK
RILDESMTATLRGYLEKVVSEGGGKKAFIDGYHIGGKTGTAQKPNPNGGGYEHGKYIASF
VGMAPASDPKITVMVSIDEPDPSNYYAGQISAPVGQKVFNDIFNYLGIKPDTSSSDAAKS
MLKDVVIPNIRGMKKEDAIKTLKNLNIDADVDGNGEYVSNTTPIPGITVKEGTKVVLYTG
DSPNYNNNDVIVPNLTGYSKKEAEETLKSLGLDFKISGDGVVESQSIDAGKQVNKGTVLT
LKLEENMSE
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
ttgcccaaaaggatattagttgataaggctactattagaaatagaatttttattgtattt
ctaattttaacttgtgtaatctttttactatgctacaagctttttaatgtaatggttgca
agatcttctaggtataagaaaatggcacaagaacagtggacaagtgaagttaagatttca
gctaaaagaggaagaatattagatagaaatggcgaagaactagccataagtggtaatgtt
tatagagttgatttggatttaaatactataaagaattctttggctgaaaagaagatgaaa
atggacgaacttgcagataggctttctagtgcacttgatatggataaaaaagatgtctct
aaacagcttaacaaaaagtttaaagatggaagaccaatgggatctgcaattttaacaaga
agaatagataaggataaggctaataaagttttagctataaatgtaaaaggagtaatggtt
tctcctgatacaaaaagatattatccaaacagcgatttcttatcacaggttattggacat
actaactcagatggagatgggcttacaggggttgaacttaaatataacaaataccttaaa
ggtaagccaggggttagaaaggctgagatagataaaaatagtgcaaatttaccttacaca
atatctgaatattcaaaaccgttggatggcagagatgttgtccttactatagataaaaat
atgcagtattttgctgaaaagtacgcccaagaggctttagttaataataaagcaaaggct
gtgtcaatacttataatgaatcctaaaaatggtgaaatacttgctatggctaacaagcct
gattatgatttgaatgacccttgggataaaagtaaaagttatgatgaacttcagaaaagt
tggagaaatagagtagtaagtgatgcttttgagcctggatctatatttaaggttataact
tctagtgcagctatgagtttagggatagttcatgagaatgataaatttaactgcggggga
agtattactgtagctaaaaaaactatccactgctggaaaagaacagggcatggagaagaa
acttttgtagatattcttaaaaattcttgtaatgttggttttgctgaactaggagaaagg
cttggagctaaaaatcttaatgattatataaataaatttgggtttggaagaaaaacaggt
atagatctcccaggagaagcacggggaataattagaccaactaataaaataggacctgtg
gatttagctacaatagcatttggacaatctaatactgtttcaatggttcaatacatgcag
gcttttaattccgtagcaaatggaggttatttaataacaccacatgtaatgagggaaata
agtcatgtagagaataatagacaggttgtagataaagagtatagcgattataataagaaa
aggattttagatgaaagcatgacagccaccttaagaggatatcttgaaaaggtagtctca
gaaggtggaggtaaaaaagcttttatagatggatatcatatcgggggaaaaacaggtaca
gctcaaaagccaaatcctaatggaggaggatatgagcacggaaagtatatagcttcattt
gttggaatggcgcctgcaagtgatcctaaaattacagtaatggtctcgatagatgagccg
gatccatcaaattattatgcaggtcaaatatctgcgcctgtaggtcagaaggtttttaat
gatatatttaactatctaggaataaagcctgatacatcaagttctgatgctgccaagagt
atgctaaaagatgtagttattccgaatatacgtggtatgaaaaaggaagatgctataaaa
acgcttaaaaatcttaatatagatgcggatgttgacggtaatggggaatatgtaagcaat
acaactcctattccaggcataacagtaaaagaaggaacaaaagttgtactttacacagga
gacagtcctaattataataataatgatgttatagttccaaatttaactggatatagtaaa
aaagaagcagaagaaacattaaaaagtcttgggcttgattttaaaatttcaggagatggt
gttgttgaatcgcaaagtattgatgctggtaaacaggtcaataagggtacggttttaaca
cttaaacttgaagagaatatgagcgagtga
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