KEGG   Clostridium acetobutylicum DSM 1731: SMB_G2176
Entry
SMB_G2176         CDS       T01548                                 
Symbol
whiG
Name
(GenBank) sigma factor of SigD/WhiG family
  KO
K02405  RNA polymerase sigma factor FliA
Organism
cae  Clostridium acetobutylicum DSM 1731
Pathway
cae02020  Two-component system
cae02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:cae00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    SMB_G2176 (whiG)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    SMB_G2176 (whiG)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cae03021]
    SMB_G2176 (whiG)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:cae02035]
    SMB_G2176 (whiG)
Transcription machinery [BR:cae03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SMB_G2176 (whiG)
Bacterial motility proteins [BR:cae02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    SMB_G2176 (whiG)
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 UPF0122 HTH_23 DUF1492 Sigma70_ECF HTH_Tnp_4 GerE
Other DBs
NCBI-ProteinID: AEI33121
LinkDB
Position
complement(2236681..2237406)
AA seq 241 aa
MAIDGIVDDREALIKKYIPLVKYIASRVIIGKSKYIEYEDLVGYGMIGLMDALKKFDQSK
GMKFSTYSSIRIKGAMIDELRKNSPISKGAMDKLNRYNLVVERLEKELSREPTELEIASG
LGVGRKEVGEIEGYINYISVVSLEDLIFSEDDDMPLIGTIEDEKSPSPEKALEEKEEIEY
LAKGIELLNEKDRMVLSLYYYEGLTLKKIGNILNVSESRVCQLHTRAIMHLRKSLKKLKY
E
NT seq 726 nt   +upstreamnt  +downstreamnt
atggcaatagatgggattgtagatgatagagaggctttaataaaaaaatatatacctctt
gttaagtatatagcttcaagagtaataattggtaagagtaaatatattgaatacgaagat
ttagtagggtatggtatgataggtcttatggatgctttgaaaaaatttgaccagagtaag
gggatgaagttctcaacatattcatctataagaataaaaggagctatgatagatgagtta
agaaagaatagtcccatttctaaaggagctatggacaagcttaacagatacaatttagta
gtagagagattggaaaaggaactatccagagaacctacggaattagaaattgcaagtggc
ttaggtgttggaagaaaagaagttggagagattgaaggatatattaattatatatcagta
gtatccttagaagatttaatattttcagaggacgatgatatgcctttaataggaactata
gaagatgagaaaagtccaagccctgaaaaggctttagaagagaaagaagaaattgaatac
cttgctaagggaatagaacttcttaatgagaaagatagaatggtattatcactatattac
tatgaaggattgactttaaagaaaataggaaatattttaaatgtgtctgaatctagagtt
tgtcagcttcatactagagctataatgcaccttagaaaatcacttaaaaagctaaaatat
gaataa

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