Clostridium acetobutylicum DSM 1731: SMB_G2296
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Entry
SMB_G2296 CDS
T01548
Symbol
addB
Name
(GenBank) ATP-dependent exonuclease synthesis protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cae
Clostridium acetobutylicum DSM 1731
Brite
KEGG Orthology (KO) [BR:
cae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cae03400
]
SMB_G2296 (addB)
Enzymes [BR:
cae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SMB_G2296 (addB)
DNA repair and recombination proteins [BR:
cae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SMB_G2296 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AEI34096
LinkDB
All DBs
Position
complement(2366115..2369576)
Genome browser
AA seq
1153 aa
AA seq
DB search
MSLRFIYGRAGSGKSQFCIESINTRIEKGGDKPLILIVPEQFSFQSEKNILDLIGEKSIN
RVKVISFKRLAYRIFDEVGGIAREHMNSSGKSMLFYHIMNTLKSEFRVFALSARQKGFVN
TIADTVSEFKKYELTTEVLRDTIDEIEDEELKNKLHDLSLIYDEFNRLLYKNYIDPDDDL
TILKDKIKQSTVLQGAEIWLDEFSSFIPQQYGIIEELLKKCSRVNITLTMDYDNASKDND
IFSVTQNTEKRLLKLAENNNISIEKPINLNGRPFYRFKNSPELSFLEKNLYSFPYEIYKK
GPDKIEIFKTSNLYTEVEKIARNIIEFVREDNVRFSDIAVVTGDLGSYEKTVSVIFKEYR
IPFFIDRNKDIEDNTLIILIKSIIDIFVKNWSYETVFRYLKTGFADIEPDEIDILENYVL
AAGIKGKKKWTEEEWTYNVYGDALEGDISEESKEKLSKVNEIKNRFLRPILNFRERVLRR
NNVAEICRALFEFLYDINVPEAVEKMVNEFRESGRQILANEYSQIWNIIIELMDQLVEVM
GNEKVNLEQFSRILFIGIKEHKMGLIPSSLDQVLVGSIDRLKSHAIKILYIIGVNDGVFP
SAAMEEGILSDRDREILNSKGVELAKDTKTQAMEQRFLVYTAITNSKEYLFLSYPIADYE
GKTLRPSLIVNRVKTLFPKIVEKSDVIKIENDEESMKLISATVPTFNEMISSFRKEIDGE
GEVSSIWHDVYRWYSKSDEWTGKCNNMFKAISYTNQVDYISEEKALKLYGGSLKMSVSRL
EKYIECPFSYYVQYGLNIKDRKIFSLTPPDLGSFMHKVIDRFCETIKEENIDWNEVNDHI
CEEKIYKIVDQEIEGRGGSILNSSPRYSYIALRLKRILKRTVRIVAEQFKRGSFKPVGYE
VSFENGGSYPPITVGLNDGSEVVLTGRIDRIDMMEKDGSTYIRIVDYKSGNKIFKLSDVY
YGFDIQLLLYLNAILENENLDEEDKVLPGAILYFTMDDPIIKGKNNLTDEQIREEIMKSL
KMKGLLLSDPDVIKEMDREMEGSSIIIPASIKKDGTLGRSSAATKEQFDILIEHVRNLVV
KNCENLLMGDIRIKPYKKGKEKPCDYCMYSSICRFDTMFDGNNYRYVKEKSDEEVWKLIE
REMSEEGDERGED
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
gtgagtttgaggtttatatatggaagagcaggaagtggaaaaagtcaattttgtatagaa
agtataaatactagaatagaaaaaggcggagataagccccttatattaattgtaccagaa
caattttcatttcagagtgaaaaaaatattttggacttaattggtgaaaagagtattaat
agggtaaaggtaataagctttaaaagattggcatatagaatatttgatgaggttggagga
atagcaagagaacacatgaattcctctggcaaaagtatgcttttttatcatataatgaat
actttaaagagtgaatttagggtttttgctctttcagctaggcagaaaggttttgtaaac
accatagctgacaccgtaagtgagtttaaaaaatacgaacttacaacagaagtacttaga
gatactatagatgaaatagaagatgaagagcttaagaacaaattgcatgatttaagtttg
atatatgatgaatttaatagactgctttataagaattatatagaccctgatgatgattta
acaatacttaaagataaaataaagcagtctacagtgcttcagggagcggagatatggtta
gatgagttttcaagcttcattcctcagcagtatggaataatagaggagttgctgaaaaaa
tgttctagagtaaacattacgttaactatggattacgataacgcttcaaaagacaatgat
attttttctgtaacccaaaatacagaaaaaaggctgcttaaattagctgagaataataat
ataagcatagagaaacctatcaatttgaatggaaggccattctatagatttaaaaatagt
cctgaattgagctttttagaaaagaatctatatagttttccatatgaaatttataaaaaa
ggacctgataaaatagaaattttcaagacttcaaatttatatactgaagttgagaagata
gcaagaaatataattgaatttgtacgtgaagataatgtaagattttcagatatagctgtt
gtaacaggagatttaggaagctatgaaaaaactgtatcggtgatttttaaggaatataga
ataccgttttttatagacaggaataaagatattgaggataatacacttataatcttaata
aaatccattatagatatttttgttaaaaattggtcttatgaaacggtatttagatatctt
aaaactggatttgcagacatagaaccggacgaaatagatatactagaaaattatgttcta
gcagctggtataaaaggaaagaaaaaatggactgaagaagaatggacatataatgtatat
ggtgatgcgctggaaggtgatatttctgaagaaagtaaagaaaagctatctaaggtaaat
gaaattaagaatagatttttaagacctattcttaatttcagagaaagagtattaagaaga
aataatgtagctgaaatatgcagagctttatttgaatttttatatgatataaatgttcct
gaggcagttgagaagatggtaaatgaatttagagaaagcggaaggcaaattttggctaat
gaatacagtcaaatatggaatataataatagaattaatggatcaattagttgaagtaatg
ggaaatgagaaggtaaacctagagcagttttcaagaatattatttataggaataaaagaa
cataagatgggactcataccatcatcacttgatcaagtattagtaggaagtatagatcgt
ttaaaaagtcatgctataaaaattctttatataataggagttaatgacggcgtatttcca
tctgcagccatggaagaaggaatattaagtgatagagatagagaaattttgaattcaaaa
ggagtggagctagctaaagatacaaaaactcaagctatggaacaaagattcttagtttat
acagctatcaccaattctaaagaatatctatttttgagctatccaatagcagactatgaa
ggaaagactttaagaccttctcttatagtgaatagggttaagacattatttcctaagata
gtagaaaaaagtgatgttattaaaatagaaaacgatgaagaaagtatgaagcttatttct
gcaacagtacccacctttaatgagatgatatcatcttttagaaaagaaatagatggagaa
ggtgaggttagcagcatatggcatgatgtatatagatggtatagcaaaagcgatgaatgg
actggaaaatgtaataatatgtttaaagccatatcgtatacaaatcaagtagattatata
agtgaagaaaaagcgttaaagctttatggtggaagtcttaagatgagtgtttcaagactt
gaaaaatatattgaatgtccattttcatattatgtgcaatatggtcttaatataaaggat
agaaaaatattcagcttaacacctcctgatttaggttcatttatgcataaggtgatagat
agattttgtgaaactataaaagaagagaatatagattggaatgaagttaatgatcatata
tgtgaagaaaaaatatataagatagtggaccaggaaatagagggtagaggaggatcaata
ctaaatagttctcctagatatagttatatagctttaaggcttaaaagaattttaaagaga
actgtaagaattgtagcagagcagttcaaaagaggaagttttaagccagtaggatatgaa
gtctcttttgaaaatggtgggagttatcccccaataactgttggacttaatgacggaagt
gaagttgtactcacaggtagaattgatagaatagatatgatggaaaaggacggaagtacc
tatattagaatagtagattataaatctggaaataagatatttaaactttcagatgtttac
tatggttttgatattcaacttttattgtatctcaatgccatactcgaaaatgaaaatttg
gatgaagaagataaggttctgccaggtgcaatattatattttacaatggatgaccctatt
attaagggaaaaaataatttaacagatgaacaaataagagaagaaataatgaaatccctt
aagatgaaagggcttttgctttctgatccagatgttataaaagaaatggatagagaaatg
gaaggaagttctattataatacctgcatcaataaaaaaggatggaacacttggaaggtca
agtgctgctactaaagaacagtttgacatattaatagagcatgtgagaaatttagttgtt
aaaaattgtgaaaacctgcttatgggtgatataagaataaagccatataaaaaaggaaaa
gaaaaaccttgtgattattgcatgtattcttcaatttgtagatttgatacaatgtttgat
ggcaataattatagatatgtaaaggaaaaatcagatgaagaggtttggaagcttatagaa
agagaaatgagtgaagagggtgatgaacgtggggaagactaa
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