Clostridium acetobutylicum DSM 1731: SMB_G2772
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Entry
SMB_G2772 CDS
T01548
Symbol
sbcD
Name
(GenBank) DNA repair exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cae
Clostridium acetobutylicum DSM 1731
Brite
KEGG Orthology (KO) [BR:
cae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cae03400
]
SMB_G2772 (sbcD)
DNA repair and recombination proteins [BR:
cae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SMB_G2772 (sbcD)
Archaeal homologous recombinant proteins
SMB_G2772 (sbcD)
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Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
DUF1574
DUF3837
DNA_pol_E_B
Motif
Other DBs
NCBI-ProteinID:
AEI33800
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Position
complement(2866486..2867712)
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AA seq
408 aa
AA seq
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MRILHTSDWHLGKNLEGYSRMDEQEEFLEDFIKIVEENNIDMVVIAGDIYDTYNPPARAE
KMFYSTLKKISQNGERVTLVIAGNHDNPERLVAAGPLARDHGIIMVGTPKSVVPTGEYGK
HKVLSSKEGFIEIEVNGERASIITLPYPSEKRLNEVLYEEMDSEEEKVKSYGDRIKQLFD
RLSENFRDDTINMVVSHLFAMGSEEGGSERNVQLGGSFIVNGDCFPKNAQYVALGHVHKP
QLVPGTHKIARYSGSPIQYNKKEINFKKKCFLVNIEAGKEPIVDEIEFKVYKPIEVWKCT
GVEEAIKKCEENKDRDCWVYLEIVTDKYIGEEEMKAMKSLKKDILEILPKVSVDNEIIDM
ASFKERPFEEIFKEFYKKERKVEPDNEVVDLLLSIINGGEAEDETHKS
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaggattttacatacttctgattggcatttaggtaaaaacttagaaggctatagtaga
atggatgaacaagaggaatttttagaagactttattaagatagttgaagaaaataatata
gatatggttgttattgcaggagatatatatgatacctacaatccaccagctagagctgag
aaaatgttttacagcacacttaaaaaaatatcacaaaatggagagagggtaacccttgtt
atagcaggaaatcatgataacccggaaaggctcgtggctgcaggaccgcttgcacgtgat
catggcataataatggttggtactcctaaatcagttgttcctactggagaatatggaaaa
cataaagtactttcatctaaggagggctttattgaaattgaagttaatggtgaaagggca
tctattattacgctgccttatccaagtgaaaaaagattaaatgaagttctttatgaagaa
atggacagtgaagaggaaaaggtaaaatcatatggtgatagaataaaacagctttttgat
aggttaagtgaaaactttagagatgatactataaatatggtggtttctcatctttttgcg
atgggaagtgaagaaggcggttctgagagaaatgttcagcttggaggaagttttattgta
aatggagactgctttcctaaaaatgctcaatatgttgctctagggcatgtacataaaccg
cagttagtaccaggtacacataaaatagcaagatattcaggttcgccaatccagtacaat
aaaaaggagataaacttcaagaaaaaatgttttttagtgaatatagaggcaggaaaagag
cctattgtagatgaaattgaatttaaggtatataaacctatagaagtttggaaatgtact
ggagtagaagaagcgattaagaaatgtgaagaaaataaggacagggactgttgggtttat
cttgagatagtaactgataaatatataggcgaagaagaaatgaaggcaatgaaaagtcta
aaaaaagatatattagaaattttgcctaaggttagtgtggataatgagattatagacatg
gcaagctttaaagaaagacctttcgaagagatttttaaagaattttataaaaaagaaaga
aaggttgagccagataacgaggttgtggatttattgttatctattataaatggaggtgag
gcagaagatgaaacccataagagttag
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