Clostridium acetobutylicum DSM 1731: SMB_G3023
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Entry
SMB_G3023 CDS
T01548
Symbol
yabF
Name
(GenBank) primase-like protein
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
cae
Clostridium acetobutylicum DSM 1731
Brite
KEGG Orthology (KO) [BR:
cae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cae03009
]
SMB_G3023 (yabF)
Enzymes [BR:
cae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
SMB_G3023 (yabF)
Ribosome biogenesis [BR:
cae03009
]
Prokaryotic type
rRNA processing factors
SMB_G3023 (yabF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4093
Toprim
Toprim_4
Toprim_2
Toprim_3
YtrI_C
MC5
Motif
Other DBs
NCBI-ProteinID:
AEI33338
LinkDB
All DBs
Position
complement(3125639..3126196)
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AA seq
185 aa
AA seq
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MIKEVIVVEGRDDITAVKRAVDAEMIAVGGFGINSKIISKIKEAQKRRGVIVLTDPDFAG
EKIRSIISKRVKGIKHARISQSEGTKNGDIGVENASPESIIRALNNAKCETQKKTYEFTI
EDMLFFKLVGNSEAKKRRDLVGNELGIGYSNGAQFLSRLNNFGISKEELINAVNTVNRRY
YDEGI
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgattaaggaagtaattgttgttgaaggaagagatgatataactgctgtaaaaagggct
gtagatgcagaaatgattgcggtaggtggttttggtataaattctaaaattataagtaaa
ataaaagaagcgcagaagcgaaggggagttattgttttaaccgatccagattttgctgga
gagaaaattagaagtataataagtaaaagggttaaaggtataaaacatgcgcgcatatct
caaagtgaaggtacaaagaacggagatataggagttgaaaatgcttctccggaatctata
atacgagcacttaataatgctaaatgtgaaactcagaaaaagacatatgagtttaccatt
gaagatatgttattctttaaattagtcggaaattcggaagctaaaaaaagaagggattta
gttggaaatgagcttggaataggttattcaaatggtgcacaatttctatctagattaaat
aactttggcatatcaaaagaggaacttataaatgccgttaatacagttaataggagatat
tatgatgaaggaatttaa
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