Clostridium acetobutylicum DSM 1731: SMB_G3124
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Entry
SMB_G3124 CDS
T01548
Symbol
yqiR
Name
(GenBank) transcriptional regulator
Organism
cae
Clostridium acetobutylicum DSM 1731
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
PAS_9
PTS-HPr
PAS_8
PAS_4
HTH_50
PAS_10
AAA_5
AAA
AAA_2
GdpP_PAS
Mg_chelatase
CCDC85
HTH_8
DUF1043
Parvo_NS1
Sec8_N
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AEI33977
LinkDB
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Position
3243129..3245132
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AA seq
667 aa
AA seq
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MFKNCITVNIKNGVHTRIAAMIVHEASKLKEKYGINLYVKQMNAKEPIAISMLALLSLKI
KENELVEISCFEDTTNGQRAVIELSNYITKSLGENIKSFSNIDAIIEESTLVNENVLENI
PMGIIVVDINCNITSINDYALNIMDKNIESVIGMPVLDIIPTSDTPLVIKTKEKKLGKTQ
HINKHIVISNCCPIISNNNVIGALCVFQDISELVGIKELNERFQKILETSHDLICFIDEN
RKISYINPTYEKCLNIKSEDVLGKDLMKISPDGYRMKVFNSKKPIENVVYTKNNVGIICT
VVPIFIGETFKGVISISKEADEIIKMAKELEKSEEELNYYKDELKRHNKLSASFNNIIGN
SSSLRDVLITADKAADSTSTVLIRGESGTGKELIAKAIHNGSPRKDKPFVRVNCAAIPEN
LIESELFGYEKGAFTGAVKSKPGKFAIANTGTIFLDEIGDIPKSMQVKLLRVLQEREFES
VGGIETQKVDVRIIAATNRNLEEMLKTGEFREDLYYRLNVLSIFLPPLRKRKEDINLLVE
HFINNISKKLNKPVKKIEESCLSCFMNYNWPGNIRELENIIERSINMCDDGVIMLKDLPF
YITNIAPQNDIVKIDDNSPLLKLEDYEKIILTIAMKKYKSYNKVGKILGITHRTVSLKCK
KYNIDVQ
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaaattgtattacagtaaatattaaaaacggagttcacactagaattgcagca
atgatagttcacgaagcatctaagcttaaagaaaaatacggtattaatttatatgtaaag
caaatgaacgctaaagaaccaattgcaataagtatgctggcactactttctcttaaaatc
aaagaaaatgaacttgtagaaatttcctgcttcgaagatactacaaatggtcaaagggct
gttatagagttgagtaattatataactaaaagcctcggtgagaatattaagtctttttca
aatatagatgcaataattgaagaaagtacattagtcaatgaaaatgtacttgaaaacata
cctatgggtattatagtggtagacataaattgcaatataacttctataaatgactacgct
cttaacattatggataaaaacattgaaagtgttattggtatgccagtattagatattatt
ccaacttcagatactcctcttgttataaaaactaaagagaaaaagctaggaaaaactcaa
cacataaacaaacatatagtaatatctaactgctgccctataatctcaaacaataatgtt
attggcgctttatgtgtatttcaagatatttcagagctggtaggcataaaagagcttaac
gaacgctttcaaaaaatactagaaacttcccatgatctaatatgttttatcgacgaaaac
agaaaaatctcttacataaatccaacttacgaaaaatgccttaacattaaatcagaggat
gtacttggaaaagaccttatgaaaatttcacctgatggatatagaatgaaagtcttcaac
tcaaaaaagcctattgaaaatgtagtctatactaaaaataatgtaggtatcatatgtaca
gttgtgccaatttttataggagaaaccttcaaaggtgtaatctcaatttctaaagaagca
gatgagattataaaaatggcaaaagagcttgaaaaatcagaggaagaacttaattactat
aaggatgagcttaaaagacacaataagcttagtgcttcctttaataatataataggcaac
agcagctctcttagagatgttcttataacagctgataaggcagcagattcaacttctaca
gttttgataagaggcgaaagtggtactggtaaagaacttatcgcaaaagctattcataat
ggaagcccaagaaaggacaagccatttgtaagagttaactgtgctgcaatacctgaaaat
ttaatagaaagtgaactttttggctatgaaaaaggtgcctttacaggtgctgttaagtct
aaacctggaaaattcgctatagcaaatacaggaacaatatttctcgatgaaattggtgat
atacctaaatcaatgcaggttaaacttcttagagtacttcaagaacgagaatttgaaagc
gttggtggtattgaaacccaaaaggtagatgttagaattatagccgcaactaacagaaac
cttgaagaaatgcttaaaactggtgagtttagggaagatttatactatagattaaacgta
ctttccatatttcttccccctctaaggaaaagaaaagaagatataaatcttttagttgag
cactttataaataacataagtaaaaaactcaataaaccggtaaagaaaattgaagaaagt
tgtctttcatgttttatgaattataactggccgggaaatataagagaacttgaaaatatt
atagaaagatctataaacatgtgcgacgatggagtaataatgttgaaggacctaccattt
tatataacaaatattgctcctcaaaacgacattgtaaagattgatgataatagtccactt
ttaaaattagaagactatgaaaaaataattttaactatcgctatgaaaaaatataaaagc
tacaataaggttggaaaaattctaggaataactcatagaactgtatctttaaaatgtaaa
aagtataatatagatgttcaatag
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