Clostridium acetobutylicum DSM 1731: SMB_G3135
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Entry
SMB_G3135 CDS
T01548
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cae
Clostridium acetobutylicum DSM 1731
Brite
KEGG Orthology (KO) [BR:
cae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cae03016
]
SMB_G3135 (truA)
Enzymes [BR:
cae01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SMB_G3135 (truA)
Transfer RNA biogenesis [BR:
cae03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SMB_G3135 (truA)
Prokaryotic type
SMB_G3135 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
pre-PUA_NIP7
DUF2344
Acid_PPase
Motif
Other DBs
NCBI-ProteinID:
AEI33336
LinkDB
All DBs
Position
complement(3252821..3253555)
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AA seq
244 aa
AA seq
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MKNVKLTLEYDGTNYCGWQKQKNVVTVQEEVEKIIGEITGEKIDVIGCSRTDSGVHAKAY
TCNFKTNTVIPPEKFYLVLNSVLPDDIVALNSEEVPMDFHSRFDNKGKTYSYTILNRLQR
AAIDRNYVYQYGHKLNCDLMREATKYILGTHDFTSFKSTGSKVKSNIRTIYEARIVEDEN
KVIFYVTGDGFLYNMVRIIVGTLLEVGEEKITPLNVKTIVESKDRTKAGRVVPAKGLCLE
KVMY
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgttaaattgacattagaatatgatggtactaactattgtggatggcaaaag
caaaagaatgttgttactgttcaagaagaggtagagaaaataataggtgaaataacagga
gagaaaattgatgttattggttgtagcagaactgactctggagttcacgcaaaagcctat
acatgcaattttaagacaaacacagttataccgcctgagaagttttatctcgtactaaat
tcagtattgccagatgatatagtagctctcaattctgaggaagtaccaatggattttcat
tcacgttttgataacaaaggaaaaacttatagctacaccattttaaatagactacaaaga
gcagctattgacagaaattatgtttatcaatatgggcataaattaaattgtgatcttatg
cgtgaggcaactaaatatattttgggaactcatgacttcacatcatttaagagcacgggc
agtaaagttaagtctaatattagaaccatatatgaagccagaatcgtagaggatgagaat
aaagtaattttttatgttacgggtgatggttttttgtacaatatggtgagaataatagta
ggaacacttttagaagtaggagaagaaaagataactcctctaaatgtgaaaactattgta
gaatcaaaggataggacaaaagcaggaagagtcgttccagctaaggggttatgtcttgaa
aaagttatgtattaa
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