Clostridium acetobutylicum DSM 1731: SMB_G3231
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Entry
SMB_G3231 CDS
T01548
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
cae
Clostridium acetobutylicum DSM 1731
Pathway
cae00470
D-Amino acid metabolism
cae00550
Peptidoglycan biosynthesis
cae01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cae00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SMB_G3231 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SMB_G3231 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cae01011
]
SMB_G3231 (murD)
Enzymes [BR:
cae01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
SMB_G3231 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cae01011
]
Precursor biosynthesis
Amino acid ligase
SMB_G3231 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
DTP-pb9_B-dom
Pyr_redox
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
AEI33586
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Position
complement(3339893..3341281)
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AA seq
462 aa
AA seq
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MKRDFNEFVKFIKNKKTAVVGMGISNRPLIHFLSKLGAEITAFDRKTKEELGDEVINEFS
SENVKFELGENYLSALKGFDVVFKTPSMRIDSEALVKAKQEGAYITSEMEEFIKYCPAKI
FGVTGSDGKTTTTTLIYNMLKEEGYKTWVGGNIGTPLFSKIKEVSTKDKVVLELSSFQLM
TIDVSPEVAVVTNLSPNHLDIHKNMEEYINAKKNIFTHQSKGNVLIINRDNEITNNMESE
ALGDLLKFSRNEKVKNGAYYNKQDGNIYLFENKICNKDDIKIKGMDNVENFMAAFCAVSK
DVSKESMIKVAMNFAGVEHRREFVRELDGVKYYNDSIASSPTRTISGLNAYERPVILIAG
GYDKHIPFEPLAEKGYDKIKVLILMGATKNKIKETFDKVICEKNIKLPIILSDNLEEAVC
EAKKVATNGDIVTLSPACASFDSFPNFEVRGNKFKEIVNNLK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagattttaatgaatttgtgaaatttataaaaaataaaaaaactgcagttgtt
ggaatgggaataagtaatagaccacttatacattttctaagtaaattaggagctgagata
actgcgtttgatagaaaaacaaaagaagaattaggtgatgaagtaattaatgaattttca
agtgagaacgtaaagtttgagcttggagagaattatttatctgcattaaaaggctttgat
gtagtatttaaaacaccgtccatgagaatagacagcgaagcattagtgaaagcaaaacaa
gagggtgcatatataacatcagaaatggaagagtttataaaatattgcccagctaaaatt
tttggtgtaacaggtagcgatggaaagactacaactactacacttatatataatatgctt
aaagaagaaggttataaaacgtgggttggaggtaatataggaacacctttgttttcaaaa
ataaaagaggtttctacaaaggataaagtagtattagaattatctagttttcaacttatg
acaatagatgtttcacctgaagtagcagttgttacaaatcttagtcctaatcatcttgat
atacacaagaacatggaggaatatataaatgcaaagaaaaatatatttacccatcaaagc
aaaggtaatgttctgataataaacagagacaacgaaataacaaataatatggagagcgaa
gctttaggagatttgttgaaatttagcagaaacgaaaaggtcaaaaatggagcatattat
aataaacaagatggaaatatatatttatttgaaaataaaatatgcaacaaggatgatata
aaaataaagggaatggataatgtagaaaactttatggcagcgttttgtgcagtgagcaag
gatgtgtcaaaagaaagtatgataaaagtagcaatgaattttgctggagtagagcatagg
cgtgaatttgtaagagaattagatggagtaaagtattataatgattcaatagcatcaagt
cctacaagaactatttcaggacttaatgcttatgaaagaccagttatacttatagcagga
ggatatgataaacacattccttttgagccacttgcagaaaaagggtatgacaaaataaag
gtactaattttaatgggagctacaaagaataaaataaaagaaacttttgacaaggttatt
tgtgagaaaaatataaaattacctataatactatcagataatttagaagaggctgtatgt
gaagctaaaaaggtagctactaatggggatattgtaacattatcaccagcatgtgcaagc
tttgattcttttcctaattttgaagtgagaggtaataagtttaaagaaatagtaaacaac
ttaaagtag
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