Clostridium acetobutylicum DSM 1731: SMB_G3340
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Entry
SMB_G3340 CDS
T01548
Name
(GenBank) SNF2 family DNA/RNA helicase
Organism
cae
Clostridium acetobutylicum DSM 1731
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2_assoc
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
SWIM
AAA_11
Ctf19_RWD2
Motif
Other DBs
NCBI-ProteinID:
AEI32754
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Position
complement(3470829..3474062)
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AA seq
1077 aa
AA seq
DB search
MDKNELLQIFNESVAGKNQSKGQRVFENDLVSSVDIKDDEDSICIKGNVISESLFSQYST
EIQMDPTDKSIVGTYCSCADYEKNAAKKNYCCKHLIATFYSSLEELSKNTRLKKAEKRKL
NKLLGIKDTLDILLGGDSSKEELKIEVYINKDRWDNRIYFELKIGLKTMTSNNLYVLKDI
NSFLLGIYQNIPIPYGKKLILNMKEQKLSVKDKKLVDFIQMIINIDKPFSYNRKIKKSFI
DGKYVYVPDYLVREFFQVIKNHRVYLNEGFDLSTDVEIIEEKPPIEISLRDVEDDYVLSV
PSGMPISLSSKNNVFLYGLGIYIPDYEYCEKIGPYFEVFNKAEEVRLSGEKEETILRKLV
PDLKRLSNSISLSSNITDKIVVAKCEFKFYFDNEDGNTILTVKVKYGAFEFNIFEDFNEK
VIYRDSKREIEVLETVRALRFERIKNKFLLGFGDDYAFTFFKTEIVRLQKIGEVFYSENF
KGIKHISSKGISGHIKTGKYNYFEMKFKIDDIPPGETVMILRAFRDNLKYYKLKNGEFID
LEELQLKNFLKLLDSISPKKLDENNIKIPKSKSIYVDEYLEEKGIRYIKGQEELKKIREK
FKEEKSLEFELPRTLKGHPREYQKKGYNWLKTLDYFGFGGILGDEMGLGKTFQVISFLLS
SPGKKSLIVVPTSLVYNWIQEFERFAPSIKVAASVGTKKEREVIIENLNEFQVIITTYNL
LKRDLSSYMALEFDYCILDEAQNIKNPHSQNAISVKKINAVNRFALSGTPMENSVMELWS
IFDFIMPEYLYDEDRFSVRYYKKLKEEPAVIEDLNRLIKPFILRRKKKEVVKELPNKIEK
IVAVDMESKQKKVYSTYAKYAVSLIEKRVEYDEFNKSKIEILSYITRLRQICLDPSVVME
DYTGGSAKINALIELLNHSIDEGHKILVFSQFTSVLKNIAERFREEKIKYSYLDGSINSK
NRMNMVQDFNEGNNSVFLISLKAGGTGLNLTSADVVIHFDPWWNPAVEEQATDRAHRIGQ
KNIVEVIKLVAKGTIEEKIIRLQEEKKRLVDSLLSEDLSTSEVFSGLDENEIIELFK
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaatgaattgcttcagatatttaatgaaagcgttgcgggaaaaaaccaatca
aaaggacagagagtatttgaaaatgacttagtttcttcagtagatattaaagatgatgaa
gatagtatatgtataaagggtaatgttatatctgaaagtctttttagtcagtacagtacg
gaaatacaaatggacccaactgataagagtatagtagggacttattgtagttgtgctgat
tatgagaagaatgcagcaaagaaaaattactgctgtaagcatttaatagcaaccttttat
agttcgctggaggagctttctaaaaatacaagattaaaaaaagctgaaaagcgtaagctt
aataaacttttaggcattaaggataccttggatattctccttggaggggatagttcaaaa
gaggagctaaaaatagaggtttatataaataaagatagatgggataatagaatttatttt
gaacttaaaataggacttaaaactatgacttcaaataatctttatgtgttaaaagatata
aatagttttcttttaggcatatatcaaaacatcccaataccctatggtaaaaagcttata
ttgaatatgaaggaacaaaaactaagtgttaaggataaaaagcttgtagattttatccag
atgattattaatatagataagccattctcttacaatagaaagattaagaaatcttttata
gatggaaagtacgtctatgtgcctgactatcttgttagagaattttttcaggttataaag
aatcatagggtttatttaaatgaaggttttgatttaagcacagatgtagaaattatagag
gaaaaacctccaattgaaattagccttagggatgtagaggacgattatgttttaagtgtg
ccttctggaatgccaatatccttaagttctaaaaataatgtttttttatatggactggga
atatatattccagattatgagtactgtgaaaaaatagggccgtatttcgaggtgtttaat
aaagcggaagaagttagattatctggagaaaaagaagagactattctaaggaaattagtt
ccggatttaaaaagactatctaatagtatatcactgtcttccaatataacagataaaata
gtagtagctaagtgtgagtttaaattttactttgataatgaagatggaaatactatactt
actgttaaagttaagtatggagcttttgaatttaatatcttcgaggattttaatgagaaa
gtgatttacagagattcaaaaagagaaattgaagttttagaaactgtaagagcccttaga
tttgagagaattaaaaataaattcctgcttggttttggagatgactatgcctttaccttt
ttcaagacagaaatagtaagacttcagaaaattggagaagtattttattcggaaaacttt
aaaggtataaagcatattagcagcaagggaataagcgggcatataaaaacgggaaaatac
aattattttgaaatgaaatttaagattgatgatataccaccaggggaaacagttatgata
ctcagggcatttagagataatcttaaatactataagcttaagaatggagaatttattgat
ttagaagaacttcagcttaagaatttcttaaagttattagattccatttctcctaaaaag
ttagatgaaaataacattaagatacctaaaagtaaaagtatttatgtagatgaataccta
gaggaaaagggcattagatacataaaaggtcaagaggagcttaagaagataagggagaaa
tttaaggaggaaaagagcttagaatttgagctgcctaggactttaaaggggcatccaaga
gaatatcaaaaaaagggatacaattggcttaaaactttggattactttggtttcggagga
atacttggagatgaaatgggacttggtaaaacctttcaagtcatttcgtttttgctatct
agcccaggcaaaaagtcattaatagtggtacctacttccttggtatataattggatacag
gagtttgaaagatttgctccaagtattaaagtagcagcatcagttggaacaaaaaaagaa
agggaagttataattgaaaatttaaatgaatttcaagttataataactacctataacctt
ttaaagagggacttatcttcatatatggccttagaatttgattattgtatactagatgag
gctcaaaatataaaaaatcctcattctcaaaatgctataagtgtaaagaagataaatgca
gttaatagatttgcactttcaggaactcctatggagaattctgttatggaactgtggtct
atatttgattttataatgcctgaatacctttatgatgaggatagatttagtgtaagatat
tataaaaagcttaaagaggaacctgcggtgattgaggatcttaatagacttataaagcca
tttattttaagaagaaagaaaaaggaagttgttaaggagcttcctaataaaatagaaaag
atagttgcagttgatatggaaagtaagcagaagaaagtttacagcacctatgcaaagtat
gctgttagtttaattgaaaaaagggtagagtatgacgagttcaataaaagtaaaattgag
atactttcatatataacaagacttaggcaaatttgccttgatccatctgttgtaatggag
gactatacaggaggaagtgctaaaataaacgcacttatagagctattaaatcacagcatt
gatgaggggcataaaatattagtattttctcagttcacttctgtgttaaagaatatagct
gaaagatttagagaagagaaaataaaatacagctatttagatggaagtataaattctaag
aataggatgaatatggttcaggactttaatgagggaaataactctgtttttctaataagt
ttaaaggcaggaggaacaggtcttaatctaacctctgcggatgttgtcattcattttgat
ccatggtggaatccggcagtagaagaacaagcaacagatagagcgcacagaatagggcag
aaaaatatagtagaggttataaagcttgtggcaaagggaactattgaagaaaagatcata
cgtttgcaggaggaaaagaagaggcttgtagacagtcttctttcagaggatttatctaca
agcgaagtattttctggtttagatgaaaatgaaataattgaattatttaagtaa
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