Clostridium acetobutylicum DSM 1731: SMB_G3480
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Entry
SMB_G3480 CDS
T01548
Symbol
polC
Name
(GenBank) DNA polymerase III (alpha subunit)
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
cae
Clostridium acetobutylicum DSM 1731
Pathway
cae03030
DNA replication
cae03430
Mismatch repair
cae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SMB_G3480 (polC)
03430 Mismatch repair
SMB_G3480 (polC)
03440 Homologous recombination
SMB_G3480 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cae03032
]
SMB_G3480 (polC)
03400 DNA repair and recombination proteins [BR:
cae03400
]
SMB_G3480 (polC)
Enzymes [BR:
cae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SMB_G3480 (polC)
DNA replication proteins [BR:
cae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SMB_G3480 (polC)
DNA repair and recombination proteins [BR:
cae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SMB_G3480 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
RNase_H_2
Rv2179c-like
DEDDh_C
HHH_3
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AEI33229
LinkDB
All DBs
Position
complement(3635790..3640148)
Genome browser
AA seq
1452 aa
AA seq
DB search
MKKINEIFSDYGVNGNINSAVVESVVLKKKSKRLEMKISSDKYIEIKEFERLNEFIRKRF
ALNDSVIEVNYVDGTDKKPIEDEIKDIIFSMSDKHPVLKSVINNSECKVENNTINFNFKI
AAAEFFKSMKYDKHLQDAIKTLYGTSYNINFVDDITSEELMLQQEARDQEMLAISKQIKE
AIGSGGISNSSAPKAPKETTYKREDTKEETKGKKDPRLILGRNAKFKENVIKITDITPDE
GRVAIEGEISNIEAKELKSGKTLVSFDLYDGSSSMTCKSFLKPGEDGEVISRLKKAKGVR
LSGIAGYSKFSGEVEMIANVILETEGIRRAKRQDNAKEKRVELHMHTKMSQMDAMTSATD
LIKRAMSWGMKSIAITDHGVVQAFPEAHKLLGRDNPDMKIIYGVEAYLAPDKKPSVTNAK
DQSIDTTYCVLDLETTGFSPKTEKITEIGIMKYENGKVIDKFSLFVNPEKPIPARVVEVT
NITDDMVKNAETIDKVFPKMLEFIKGSVLVAHNASFDIGFLKHNAKVLGYEFDFTYLDTL
SLAQAVFPQYKSYKLGRIAKNLGIKVEVAHRALDDVDTTVKVFKVMLEILKERGAKTLED
VDIYSVDEESKKEEYKKLRTYHAIILAKNYVGLKNLYKLVSYSHLNYFYKRPRILKSLYK
KYSEGLILGSACSEGELFQAILLGKPDEEVEDIARDYDYLEIQPLGNDDYLIRNGQVPNK
EAIKDINRKIIELGEKLNKPVVATGDVHFIDPEDEIYRRILEAGQGFKDADNQAPLYLRT
TEEMLQEFSYLGREKAYEVVVTNTNKISDMCEQISPISPEKCPPHIDGCEQTIKDIAYEK
AHELYGDPLPEIVQQRLDKELESIIKNGFSVMYIIAQKLVWKSNEDGYLVGSRGSVGSSF
VANMTGITEVNSLPPHYRCPKCKYSDFSDYGVKNGFDLPDKTCPVCGEPLTKDGIDIPFE
TFLGFNGDKEPDIDLNFSGEYQAKAHRYTEVIFGKGTTFKAGTIGTIAEKTAFGYVKKYY
EEKSIPVNKAEIIRISRGCTGIKRTTGQHPGGIIVVPKGREIFEFCPVQHPADDPNSDII
TTHFDYHSIDQNLLKLDILGHDDPTVIRMLQDITGINPHEIPMDDKETMSLFSSTKALGV
TPEQINSKVGTFGIPEFGTKFVRGMLLDTMPKTFSDLICISGLSHGTDVWLGNAKDLIDQ
GIVTLSEAVCTRDDIMIYLIKKGLPPNTAFKIMELVRKGKALKDPKKWAEYEALMREHEV
PEWYIDSCRKIKYMFPKAHAAAYVMMAFRIAWFKVHIPKAYYAAYFSIRAKAFDAEFMIF
GKEKVKQKMKEIQMMGNEAGPKDKDMYDDLEIVLEMYERGFNFLPIDIYKSHATKFLVEE
DGLRPPINSISGMGNVAAEGIYNAMQEEKPISSIQDLKKRAKIGNSAIDSLRKFGCLKGL
PESDQLSFFDAI
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaataaatgaaatttttagtgactatggggtaaatggtaatataaatagtgct
gttgtagaatcggtagttttaaagaaaaagagcaagagattggaaatgaaaataagctcg
gataaatatattgaaataaaggaatttgaacggcttaatgaatttataagaaagagattt
gcgttaaatgattctgtaattgaggtaaattacgttgatggaacagacaagaagcctata
gaggatgaaattaaagacattatattttcaatgtcagataaacaccctgttctaaaatca
gttataaataatagcgaatgtaaggtagagaataatactataaatttcaactttaaaatt
gcagctgcggagttctttaaatctatgaagtacgacaaacatcttcaggacgctataaaa
actctttatggtacttcatataatataaattttgttgatgatataacaagtgaggaattg
atgcttcaacaagaggcacgtgatcaggaaatgcttgctatttcgaagcagattaaagag
gccattggtagtggaggtataagtaatagttctgctccaaaagcgcctaaagaaactaca
tataaaagagaagatacaaaggaagaaacgaagggtaaaaaagatccacgcttaatattg
ggtagaaacgctaaatttaaagaaaatgtaataaaaattactgatataacaccagatgaa
ggaagagttgccatagaaggtgaaatatctaatatagaagccaaggaattaaaaagtgga
aagaccttagtttcttttgatttatacgatggatcaagttcaatgacctgtaaatctttc
ctaaagcctggtgaagacggagaggttatttctagacttaaaaaggctaagggggttagg
ctttcaggaattgctggctatagtaagttctcaggagaagttgagatgattgccaatgtt
atattagaaacagagggaattagaagagctaaaaggcaggataatgcgaaagagaagaga
gtagagcttcatatgcatacaaaaatgagtcagatggatgctatgactagtgctactgat
ttaattaagagggctatgagctggggaatgaagtccattgctataacagaccatggtgtt
gttcaggcatttccagaggcacataaactattaggaagagataatcctgatatgaagatt
atatatggagttgaagcgtacctagctcctgacaagaagccgtctgtaacaaatgctaaa
gatcaaagtattgataccacttattgtgtactagatttggagactacaggcttttctcct
aaaactgaaaaaattactgaaataggaattatgaaatatgagaatggtaaggtaatagat
aagtttagcttattcgtgaatcctgaaaaacctattccggcaagggttgtagaggttaca
aatataactgatgacatggttaagaatgcggaaacaatagataaggtttttccaaagatg
cttgaatttattaagggaagcgttttggttgctcacaatgcatcttttgatataggattt
ttaaaacataatgcaaaagtgctaggttatgagtttgactttacatacttagatacacta
tctttagctcaagctgtttttcctcagtataagagttataaattagggagaattgctaaa
aaccttggcataaaggtagaggttgctcatagggcgttagacgatgtggataccactgtt
aaagtgtttaaggtaatgcttgaaatattaaaagaaagaggagccaagactcttgaggat
gtagatatatattcagtagatgaagagtctaaaaaagaggagtataagaagcttagaacc
tatcatgcaataatattagcaaagaattatgttggtttaaagaatttatataagctagta
tcatattctcatttaaactacttttataaaagaccacgtatactaaaaagtctttataaa
aaatactcagaaggacttattttaggaagtgcttgtagtgaaggtgagcttttccaagca
atacttctaggaaagccagatgaagaagttgaggacattgctagagattatgattactta
gaaatacagcctttgggaaatgacgattatttaataagaaatggtcaggtgccaaacaaa
gaagctataaaggacattaatagaaaaattatagagctgggtgagaagcttaataaacca
gtagtggcgacaggcgatgtacacttcatagatccagaggatgaaatttatagacgtata
cttgaagctggtcaaggctttaaagatgcagataaccaggctccgctatatttaagaact
acggaggagatgcttcaggagttttcatacttaggaagggaaaaggcttatgaggtagtt
gttacaaatacaaataagatatcagatatgtgtgaacagattagccctatctcaccagag
aaatgtcctccacatatagatggatgtgagcagacaattaaggatattgcctatgaaaaa
gctcatgagctatatggtgatccactgcctgaaattgttcagcaaagactagacaaagaa
cttgaatcaattataaaaaacggattctctgtaatgtatatcatagctcaaaaattggtg
tggaaatccaatgaagatggatatttagttggttctagaggatctgttggttcctctttt
gtggcgaatatgacaggtataacagaggtaaactcgctgccaccacattatagatgtcct
aaatgtaagtactcggatttttcggattacggcgttaaaaatggatttgacttgccagat
aagacatgtccggtttgtggagagccattgactaaggatggtatagatataccgtttgaa
acctttctaggctttaatggagataaggaaccggatatagacttaaacttctctggagaa
tatcaagcaaaggcacatagatatactgaggttatctttggaaaaggaacgacctttaaa
gcaggaaccataggtacaatagcagagaaaacagcctttggatatgttaagaaatattac
gaggaaaagagtattccagtaaacaaagctgagataataagaatttcaaggggatgtaca
ggtataaaaagaactactggacagcatccaggaggtattatagttgtgccaaaagggaga
gagatttttgaattctgccctgtacagcatcctgccgatgatccaaattctgatattata
acaacacattttgactatcactcaattgaccagaacttacttaagcttgatatactagga
cacgatgatccgacggttataagaatgcttcaggatataacaggaataaacccacacgaa
atacctatggatgataaggagaccatgtcgcttttctcatcaacaaaagcactgggagta
acaccagagcagataaactctaaagtggggacatttggtattcctgagtttggtactaag
tttgtaagaggaatgcttttggatacaatgccaaaaactttttctgaccttatatgcata
tcaggactttcacatggtactgacgtgtggctaggaaatgccaaggatttaattgaccaa
ggaatagttactttaagtgaagcagtatgtaccagagatgatataatgatttatcttatt
aaaaagggacttccaccaaatactgcatttaaaataatggagcttgtacgtaagggaaaa
gctttaaaggatcctaaaaaatgggcagaatatgaagctttaatgagagagcatgaggtg
ccagaatggtatatagattcttgtagaaagataaaatacatgtttcctaaagcccatgct
gcagcttacgtaatgatggcatttagaatagcttggtttaaggttcatatacctaaggct
tactatgcagcatactttagtatcagagcaaaagcttttgatgcagagtttatgattttt
ggaaaagaaaaagtaaagcagaagatgaaggaaatccaaatgatgggcaatgaggctgga
cctaaagataaggatatgtatgacgatttagaaatagttttagaaatgtacgagagaggt
tttaattttcttcctattgatatatataaatctcatgctacaaagtttcttgtagaggaa
gatggcttgagaccacctataaacagtatatctggtatgggaaatgttgcagcagagggt
atatataatgcaatgcaggaggaaaaacctataagttctatacaggacttaaagaagcgc
gctaagataggaaattcagccatagattctcttagaaagtttggctgtttaaaaggactt
cctgaaagtgatcaattaagcttttttgatgcgatttaa
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