Caenibius sp. WL: K5X80_06160
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Entry
K5X80_06160 CDS
T08345
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
caen
Caenibius sp. WL
Pathway
caen03030
DNA replication
caen03410
Base excision repair
caen03420
Nucleotide excision repair
caen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K5X80_06160 (polA)
03410 Base excision repair
K5X80_06160 (polA)
03420 Nucleotide excision repair
K5X80_06160 (polA)
03440 Homologous recombination
K5X80_06160 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caen03032
]
K5X80_06160 (polA)
03400 DNA repair and recombination proteins [BR:
caen03400
]
K5X80_06160 (polA)
Enzymes [BR:
caen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K5X80_06160 (polA)
DNA replication proteins [BR:
caen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
K5X80_06160 (polA)
DNA repair and recombination proteins [BR:
caen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
K5X80_06160 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K5X80_06160 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH_2
NYN_YacP
NADH_dh_m_C1
Motif
Other DBs
NCBI-ProteinID:
QZP09334
LinkDB
All DBs
Position
complement(1330215..1333052)
Genome browser
AA seq
945 aa
AA seq
DB search
MADKQHLYIVDGSSYIFRAYHRLPPLTNPQGTPVGAVYGYTAMLWKLALELHQADGPTHL
AVILDKSSTSFRNDLYDQYKANRPPAPEDLVPQFPLIRDATRAFSLPCIEEEGLEADDLI
ATYAREAARQGWDVTIVSSDKDLMQLVGESAGGGRIDMLDTMKNQRIDVAEVVEKFGVPP
EKVGDVLALMGDSVDNVPGIRGIGPKTATKLIQEYGDLESALAAAETMKPSKMRERLIEE
AAMARLSRQLVELKQDCPMPMALEEFRLTAIPPAPLAEFFTTHGFSSLLRRLEGMSGEQA
SPASAPSQAGDSAAPAPESSGSRQELPPMATVDHASYRCVQTLEELDAWIARAFAARVIA
VDTETSALDAMQADLTGVSLAIGPNDACYIPLGHTCNDMFAERPEQIPFDTALARLKPLL
ESDAVLKIGQNIKYDINVLARYGIAIHPLDDTLVMSFALDAGRGEEGIGGGHGMDEQALR
HLGHTTIKFKDVCGTGRNAISFTEVPLDRATHYAAEDADVTWRLHALLRNRLGDEGGTRI
YERVDRPLIPVVARMERHGIKVDREQLARLSTEFADRIGALEKEIHALAGAEFTIGSPKQ
LGDILFDKLGYKGGRKGKSGQYSTDQAILEKLAAQGADIAARVLDWRQLAKLKSTYTDAL
QAAINPATGRVHTSYSLVGAQTGRLSSTDPNLQNIPARTDIGRRIREAFVAEEGNVLLSA
DYSQIELRLAAHLADVPALKDAFAKGEDIHARTAMEMFGLVDRDTRARAKTINFAILYGI
SRWGLAGRLGVEPDEAQAMIDRYFERFPGIQRYIVATLEQVRECGYSQTLFGRKTWFPRI
NSKNQAERQGSERAAINAPIQGTCADIIKRAMTRMMPELEAAGLGHVRMLLQVHDELVFE
LPEADVAAASAVIQRVMDDAAGPAIRLDVPLGVEIGIGKNWDAAH
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaacagcatctctatatcgtcgacggatcgtcctacattttccgcgcctat
catcggctgccgccgctgaccaacccgcagggaacgcctgtgggcgcggtctacggctac
accgccatgctgtggaaactggcgctggagctgcatcaggccgacgggcccacccatctg
gcggtgattctcgacaagtcgagcacctcgttccgcaacgatctttacgaccagtacaag
gccaaccgcccccccgcgccggaagatctggtgccgcagtttccgctgattcgcgatgcg
acgcgcgctttcagcctcccctgcatcgaggaggaagggctcgaagcggacgatctcatc
gccacttacgcccgcgaagccgcgcgtcagggatgggatgtgacgatcgtttcctcggac
aaggacctgatgcaactggtcggcgaaagcgccggtggcggccggatcgacatgctcgac
acgatgaagaatcagcgaatcgacgtggctgaagtggtcgaaaaattcggtgttccgccc
gaaaaggtcggcgacgtgctggcgctgatgggcgattcggtcgacaatgtgccgggtatt
cgcggaatcgggcccaagacggcgaccaagctgatccaggaatacggcgatctcgaaagc
gcgctggccgccgccgaaacgatgaaaccgtccaaaatgcgcgagcggctgatcgaggag
gcggcaatggcccggctcagtcgccagctcgtcgaattgaagcaggattgcccgatgccg
atggcgctggaggaattccgcctcaccgcgattccgcctgcaccgctggccgaattcttc
accacgcatggtttttccagcctgctgcggcggctcgaaggcatgtcgggcgagcaggca
agcccggcgtcagccccgtcgcaggcgggcgattcggcggcccctgcccccgaatcgagc
ggcagcaggcaggaactgccgcccatggcgacggtggaccatgccagctatcgctgcgta
cagacgcttgaggaactggacgcctggatcgcgcgcgctttcgccgcgcgggtcatcgcg
gtcgataccgaaaccagcgcgctcgatgcgatgcaggccgatctgaccggtgtcagcctt
gccatcggtccgaacgacgcctgctatattccgctcggccatacctgcaacgacatgttc
gccgaacggccggagcagattccgttcgacaccgcgctggcccggctcaagccgctgctg
gaaagcgatgcggtgctcaagatcgggcaaaacatcaaatacgacatcaacgtgcttgcc
cgctacggcatcgcgatccacccgctcgacgatacgctggtgatgagcttcgcgctcgac
gctgggcgcggcgaggaagggatcggcggcgggcacggaatggacgagcaggccctgcgt
cacctcggccacaccacgatcaagttcaaggatgtgtgcggcaccggccgcaacgcgatc
tcctttaccgaagtcccgctcgaccgggcaacgcactatgccgcggaagacgccgacgtg
acctggcggctgcatgcgctgctcaggaatcgcctcggtgacgaaggcggcacgcgcatt
tacgagcgggtggaccggcccctgattcccgtggtggcgcggatggagcggcacggcatc
aaggtcgatcgcgaacagctcgcccgcctgtcgaccgaatttgccgaccggatcggcgcg
ctggaaaaggaaatccatgcgctggccggggccgaattcactatcggcagccccaagcaa
ctgggcgatatcctgttcgacaagctcggctacaaaggcgggcgcaaaggcaagagcggg
caatattcgaccgatcaggccattctggaaaagctcgccgcgcaaggggcggatatcgcc
gcccgggtgctcgactggcggcaactggccaagctgaaatcgacttataccgatgcgttg
caggccgcgatcaatccggccacgggccgggtccacaccagctacagcctggttggcgcg
caaacgggccggctgtcctccaccgaccccaatctccagaacatcccggcccgcaccgat
atcggccgccgcatccgcgaagcgttcgtggcggaggaaggcaatgtcctgctgtcggcg
gactacagccagatcgaactgcgccttgccgcgcatctggccgatgtgcccgcgctgaag
gacgcgttcgccaagggcgaggatattcacgcgcgcacggcgatggaaatgttcggcctg
gtcgaccgcgacacccgcgcccgcgcgaaaacgatcaatttcgccattctctacggcatt
tcccgctggggtctggccgggcggctgggcgtggaaccggacgaggcgcaagcgatgatc
gaccgctatttcgaacgtttccccggtatccagcgctatatcgtcgccacgctggagcag
gtgcgcgaatgcggttattcgcagacgctgttcggccgcaagacctggttcccgcgcatc
aattcgaagaatcaggccgaacggcaggggagcgagcgcgccgcgatcaacgcgccgatc
cagggaacctgcgccgatatcatcaagcgcgcgatgacccgcatgatgcccgaactcgaa
gcggcgggcctcggccatgtccggatgctgctgcaagtgcatgacgaactggtgttcgaa
ctgcccgaagccgatgtcgccgcggccagcgcggtgattcagcgggtgatggacgacgcg
gcgggcccggcgatccggctggacgtgccgctgggcgtggaaatcggcatcggaaagaac
tgggatgccgcacactga
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