Caenibius sp. WL: K5X80_08965
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Entry
K5X80_08965 CDS
T08345
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
caen
Caenibius sp. WL
Pathway
caen03420
Nucleotide excision repair
caen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
caen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K5X80_08965
03430 Mismatch repair
K5X80_08965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caen03400
]
K5X80_08965
Enzymes [BR:
caen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K5X80_08965
DNA repair and recombination proteins [BR:
caen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K5X80_08965
MMR (mismatch excision repair)
Other MMR factors
K5X80_08965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
DUF3553
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QZP06856
LinkDB
All DBs
Position
complement(1878324..1880657)
Genome browser
AA seq
777 aa
AA seq
DB search
MFPSCSPVTTPDNALNPALPGESEPPYLAGLNPPQREAVLTTEGPVLMLAGAGTGKTAAL
TTRLAHLVATRRAWPSEILCVTFTNRAAREMRERVGHLIGPAVEGMPWLGTFHAVCAKML
RRHAELAGLQSNYTIIDTDDQLRLLRQLIVEQGLDEKRWPARQLAGLIDRWKNRGLNPDD
LDALDNEAYADGRGQQFYTLYQARLKALNACDFGDLMLHILNVFRQHRDVLEHYQQRFKY
IMVDEYQDTNAVQYLWLRLLAQARKNICVVGDDDQSIYSWRGAEVANILRFEKDFPGAKV
IRLEQNYRSTPDILGAASGLIGENSQRLGKTLWTEASGGDKVRVVGVWDAPEEARRIGDE
IERLEREGAPLDRVAILVRAQYQTREFEDRFIQIGLPYKIIGGFRFYERAEIRDALAYLR
VIAQPQDDLALERIYNQPKRGLGAKALETMHRKARELDQPLFVGMSALAEGSDLPARARN
TLAALVGDFARWREQSETLSPAELLRLVVEESGYTAMLQADHSPESAGRLENLSELARAM
EDYPTLGDFLEHVSLVMDNDAASDGEKITIMTIHAAKGLEFDHVFLPGWEDGVFPSQRAL
DEGGLASLEEERRLAYVAITRARRRCTIYYAANRRIYGQWTSSIPSRFIAELPDDHTDQE
TTLSGGASLWRANWSEHDDPFAHVARDRPDRAQTRGPGWQRAAAAPFDPAPRPVKESTRS
AASFAARPRTDITIGMRVFHEKFGYGEVTGQEGNKLEVAFENAGTKRVLDSFVSLPE
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgttccctagttgttcaccggtgaccacccctgacaatgccttgaatcccgctctcccc
ggcgagagcgagccgccctatctcgcagggctcaacccgccgcagcgcgaagccgtgctg
acgaccgaaggcccggtgctgatgctggctggcgcgggcaccgggaaaaccgccgcgctg
acgactcgcctcgcccatctcgtcgccacgcggcgcgcgtggccgagcgaaatcctctgt
gtcacgttcaccaaccgcgcggcgcgggaaatgcgtgaacgcgtggggcacctgatcggc
ccggcggtggaggggatgccctggctgggcacgttccatgcggtgtgcgccaagatgttg
cgccgccacgccgaactggccgggctgcaaagcaattacaccattatcgataccgacgat
cagctccgcctgctgcgccagttgatcgtcgaacaagggctggacgaaaagcgctggccc
gcccgccagctcgccgggctgatcgacaggtggaagaaccgcggcctcaatcccgacgat
ctcgatgcattggacaacgaagcttatgccgatggccgggggcagcagttctacacgctc
tatcaggcccgcctgaaagcgttgaacgcctgcgatttcggcgatctcatgctgcacatc
ctgaacgttttccgccagcatcgcgatgtgctggagcactatcagcagcgcttcaaatat
atcatggtggacgaatatcaggacaccaacgcggttcagtatctctggctgcggttgctg
gcgcaggcgcgcaagaacatctgcgtggtgggggacgacgatcagtcgatctattcatgg
cgcggcgcggaagtcgccaatatcctgcggttcgaaaaggattttcccggcgcgaaagtg
atccgcctggaacagaattatcgctccaccccggatatcctcggcgcggcatcggggttg
atcggcgaaaacagccagcgcctcggcaagaccttgtggaccgaggcatcgggcggcgac
aaggtccgcgtcgtcggcgtgtgggatgcgcccgaagaagcccgccggatcggggacgag
atcgaacggctcgaacgcgaaggcgccccgctcgatcgcgtggcgatcctcgtgcgggcc
cagtaccagacccgcgaattcgaagaccgcttcatccagatcggtctgccctataagatc
attggcgggttccgcttctacgaacgggccgaaatccgcgatgcgctggcctatctgcgc
gtcattgcccagccgcaggacgatctggcgctggaacgcatttacaaccagcccaagcgc
ggcctgggggccaaggcgctggaaacgatgcaccgcaaggcccgcgaactggatcagccg
ctgttcgtggggatgagcgcgctggccgaaggcagcgatctgcccgcccgcgcgcgcaac
acgctggccgcgctggtcggcgatttcgcgcgctggcgcgaacagagcgaaacgctgagc
ccggccgaactgctgcggctggtggtggaagaatccggctacaccgcgatgctgcaggcg
gaccattcccccgaaagcgccgggcggctggaaaacctgtccgaactggcgcgggcgatg
gaagactatcccacgctgggcgatttcctcgaacatgtcagcctggtgatggacaacgat
gccgccagcgacggcgagaagatcaccatcatgacaattcacgccgccaagggcctggaa
ttcgatcatgttttcctgcccggctgggaagatggcgtgttcccttcccagcgcgcgctc
gacgaaggcggccttgccagcctggaggaggaacgccgcctcgcctatgtcgcgatcact
cgcgcacggcggcgctgcacgatctactatgccgccaaccggcgaatttacggccagtgg
accagttccattcccagccgcttcattgccgaactgcccgacgatcacaccgatcaggaa
accacgctgagcggcggtgcatcgctatggcgcgccaactggtcggagcatgacgatcct
ttcgcccatgtcgcccgcgaccggcccgaccgcgcccagactcgcggccccggctggcag
cgcgcggccgccgcaccattcgatccggccccgcgcccggtgaaggaatcgacccgcagc
gccgccagtttcgccgccaggccgcgcaccgacatcaccatcggcatgcgcgtcttccac
gagaagttcggttacggcgaagtcaccgggcaggaaggcaacaagctcgaagtcgcgttt
gaaaacgccgggaccaagcgcgtgctcgacagtttcgtttccctgccggaataa
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