Caenibius sp. WL: K5X80_09155
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Entry
K5X80_09155 CDS
T08345
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
caen
Caenibius sp. WL
Pathway
caen02024
Quorum sensing
caen03060
Protein export
caen03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
caen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
K5X80_09155 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
K5X80_09155 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K5X80_09155 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
caen02044
]
K5X80_09155 (ffh)
Enzymes [BR:
caen01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
K5X80_09155 (ffh)
Secretion system [BR:
caen02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
K5X80_09155 (ffh)
Eukaryotic Sec-SRP protein
K5X80_09155 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_30
Zeta_toxin
ABC_tran
AAA_22
AAA_33
NACHT
AAA_19
AAA_31
6PF2K
DnaB_C
APS_kinase
Thymidylate_kin
AAA_14
KTI12
Motif
Other DBs
NCBI-ProteinID:
QZP06888
LinkDB
All DBs
Position
1914397..1915854
Genome browser
AA seq
485 aa
AA seq
DB search
MFDSLSDRLGGVFDRLRGRGALSEQDVRDAMREVRVALLEADVALPVARRFIDAVTEKAV
GQNVLKSVTPGQQVVKIVNDELVEMLGGAETVGINLDARPPVVIMMVGLQGSGKTTSTAK
IAKLLKEKQGKKVMMASLDVNRPAAQEQLAVLGEQAGVATLPIVTGQAPVDIATRALQAA
KLQAVDVLMLDTAGRLHVDDALMAEMKAVAAISNPHEVLLVVDSLTGQDAVNVAQSFTAG
VDLTGVVLTRMDGDARGGAALSMRAVTGKPIKFAGMGEKLDAIEPFHPGRVASRILGMGD
VVSLVEKAAAVIEKEEAEQLAERMMKGQFDLNDLRTQLKQMQNMGGLGMLAGMMPGMKKA
KAAMAASGVNDKVLVHMDAIIGSMTPAERKRPELLNAKRKKRVAAGSGTQVQDINKLLKM
HQEMGRAMKQIKKMGGLKGLGAMFGKGGLGAAMPGLGGGAGGGLGGLGGGADLPPELQNL
LNNKK
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatagcctttccgatcgtctcggcggcgtattcgatcgcctgcgcgggcgcggt
gcgctgagcgagcaggacgtgcgcgatgcgatgcgcgaagtgcgcgtggcgttgctcgaa
gccgatgtcgcgctgccggtcgcccgccgcttcatcgatgccgtcaccgaaaaggccgtc
ggccagaacgttctgaaatcggtcacgccgggccagcaggtcgtcaagatcgtcaatgac
gaactggtggaaatgctcggcggggctgaaaccgtcggaatcaatctcgatgcccgcccg
cccgtcgttatcatgatggtcggcttgcagggctcgggcaagaccaccagcaccgccaag
atcgccaagctgctcaaggaaaagcagggcaagaaggtgatgatggcgtcgctcgacgtc
aatcgccccgccgcgcaggaacagcttgccgttctgggcgagcaggcgggcgtcgccacg
ctgccgatcgttaccgggcaggccccggtcgatatcgccacccgcgccttgcaggcggcg
aagctgcaggcggtcgacgtgctgatgctcgacaccgcgggccgtctccatgtcgacgat
gcgctgatggccgaaatgaaggctgtcgccgcgatttccaatccgcacgaagtgctgctg
gtggtcgattcgctcaccggccaggatgcggtgaacgtcgcgcagagctttaccgccggg
gtcgatctgaccggcgtcgtgctgacccggatggacggcgatgcgcgcggtggcgcggcg
ctgtcgatgcgcgccgtcaccggcaagccgatcaagttcgcggggatgggtgaaaagctc
gatgcgatcgagccgttccatcccggccgggttgccagccgcattctcggcatgggcgat
gttgtctcgctggttgagaaagccgccgccgtcatcgagaaggaagaggcggagcaactc
gccgagcggatgatgaaggggcagttcgatctgaacgaccttcgcacccagttgaagcag
atgcagaacatgggcgggctcggcatgctggcgggaatgatgcccggcatgaagaaggcc
aaggcggcgatggccgccagcggcgtgaacgacaaggtgctggtccacatggatgcgatc
atcggttcgatgacgcccgccgaacgcaagcgccccgaactgctcaatgccaagcgcaag
aagcgcgtggccgccgggtccggcacccaggtgcaggacatcaacaagctcctgaagatg
catcaggaaatgggccgcgcgatgaagcagatcaagaagatgggcgggctcaagggcctc
ggcgccatgttcggcaagggcggtctcggcgccgcgatgcccggtctcggcggcggggcc
ggtggcggccttggtgggctgggcggcggggcggacttgcctcccgaactgcagaatttg
ttgaataacaaaaagtaa
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