Caenibius sp. WL: K5X80_10080
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Entry
K5X80_10080 CDS
T08345
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
caen
Caenibius sp. WL
Brite
KEGG Orthology (KO) [BR:
caen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caen03032
]
K5X80_10080 (gyrA)
03400 DNA repair and recombination proteins [BR:
caen03400
]
K5X80_10080 (gyrA)
Enzymes [BR:
caen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K5X80_10080 (gyrA)
DNA replication proteins [BR:
caen03032
]
Prokaryotic type
DNA Topoisomerases
K5X80_10080 (gyrA)
DNA repair and recombination proteins [BR:
caen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K5X80_10080 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
NTPase_1
DUF2835
Fungal_virus_P2_N
Motif
Other DBs
NCBI-ProteinID:
QZP07058
LinkDB
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Position
complement(2126787..2129561)
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AA seq
924 aa
AA seq
DB search
MSDDTDTLTPPVPSSSPDIERIDIVDEMKTSYLDYAMSVIVSRALPDVRDGLKPVHRRIL
FASQEGGMVAGRPYRKSAKIVGDVMGNYHPHGDSAIYDALARMTQSWSMRVPLVDGQGNF
GSMDPDPPASMRYTEARLARVSNSLLDDLDKDTVDFQDNYDGSRREPQVLPARFPNLLVN
GAGGIAVGMATNIPPHNLGEVIDGCLAFIENPAITTEELFEIIPGPDFPTAPLILGSAGA
RAAYTTGRGSILMRCRHEIEEGRGDRRSIVLTSIPFQVGKSNLVEKIAEAAKDKRIEGVS
DIRDESNREGVRVVIDLKRDATPEVVLNQLWRHTPAQSSFPANMLAIRGGRPEVLSLRDM
VQCFIQFREEVITRRTKFELNKARDRAHILLGLVVAVSNLDEVVAIIRSASNPAQAREKL
LAREWPIGDIAPYIRLVEAFEPTAGEDALDTYRLSEIQVKAILDLRLHRLTALGRDEIGD
ELKELATAIEEYLSILADRAKLYRVMRGELEEVRSLYATPRIAEIAPAWDGLEDEDLIER
DDMVVTVTLDGYIKRTPLSTFRAQNRGGKGRAGMATKDEDVVSDMFVTSTHNPVLFFSTA
GKVYRLKVWKLPEGGPATRGRPIVNLLPALDQGETIATVLPLPEDEASWGALSVVFATAK
GSVRRNSMDAFANIPSNGKLAMRFEDDSADRLIGVALLGSGDDVLLASRNGKAIRFAADE
VREFTSRTSTGVRGMTLKDGDEVVSLSILHRVGTKPEERDDYLRFAPWKAEKEGQPEMDE
ARFTELVEKEQFILTICANGYGKLSSAYEYRRTGRGGQGITNIDNIRRNGPVVASFSATQ
ANQLMLVTDQAKLIRIGLDSLRVIGRASAGVRLFDVADNEHVVSAVRIDEPEEAEVLEDA
VEAGSSVETDSTDTPGGADSDEAV
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgacaccgataccctcaccccgcccgttccctcctccagcccggatatcgaa
cggatcgacatcgtcgatgaaatgaagacgagctatctcgattacgcgatgagcgtgatc
gtgtctcgtgcgctgcccgatgtgcgcgatgggctcaaacccgtgcatcgccgcatcctt
ttcgccagtcaggaaggcggcatggttgccggccggccctaccgcaaaagcgccaagatc
gtcggcgacgtgatgggtaactatcacccgcacggcgactccgcgatctacgatgcgctg
gcgcgcatgacgcagtcctggtcgatgcgggtgcccttggtcgatggtcaggggaacttc
ggttcgatggacccggatccgccggcttccatgcgatataccgaagcgcgccttgcccgc
gtttccaacagcctgctcgacgatctcgacaaggataccgtcgattttcaggacaactac
gacggttctcggcgtgagccgcaggttctcccggcccgcttccccaatctgctggtcaac
ggggctggcggtatcgccgtcgggatggccaccaatatcccgccgcacaatctgggtgaa
gtgatcgacggttgccttgctttcatcgaaaaccccgccatcactaccgaagaactgttc
gaaatcattcccgggccggatttccccaccgcccccttgattctcggttcggcgggcgca
cgggcggcctataccaccgggcgcggatcgatcctgatgcgctgccgccacgagatcgag
gaaggtcggggggaccggcgctcgatcgtgctgacctcgatcccgttccaggtcggcaaa
tccaacctggtcgaaaaaatcgccgaagccgccaaggacaagcggatcgaaggcgtctcc
gacattcgcgacgaatccaaccgcgaaggcgtccgcgtggtcatcgatctcaagcgcgat
gccacgcctgaagtcgtcctcaaccagctttggcgccacacgcccgcgcaatcgagcttc
ccggccaatatgctcgccatccgtggcggcaggccggaagtgctttcgctgcgcgatatg
gtgcagtgcttcatccagttccgcgaagaagttatcacccgccggaccaagttcgaactg
aacaaggcgcgtgaccgggcgcatatcttgctcgggctggtggtcgcggtttccaatctc
gatgaagtggtggcgatcatccgcagcgcctccaatccggcacaggcgcgcgaaaagctg
ctggcgcgcgaatggccgattggcgatatcgcgccctatatccggctggtcgaagcattc
gagccgaccgctggcgaagacgcgctggatacctatcgcctgtcggaaatccaggtgaag
gccattctggacctgcgcctgcaccggctcacagcgctgggccgcgatgaaatcggggat
gagctcaaggaactggccaccgcgatcgaagagtatctttcgatcctggctgatcgggcc
aagctctatcgggtcatgcgcggggaactggaagaagtccgctcgctctacgccacgccc
cggattgccgaaatcgccccggcctgggatgggctggaagatgaagacctcatcgaacgc
gatgatatggtcgtcaccgtaacgctcgatggctatatcaagcgcaccccgctttcgact
ttccgcgcgcagaaccgcggtggcaagggccgcgcgggcatggcgaccaaggacgaggat
gtcgtcagcgacatgttcgtgacgagcacacacaatccggtgctgttcttctccaccgcc
ggcaaagtctatcgtctcaaggtatggaaactgccggaaggcggccccgccactcgcggc
cgcccgatcgtcaacctgctgcccgcgctggatcagggtgaaacgatcgccactgtcctt
cctctgcccgaggatgaagcgagttggggcgctctcagcgtcgtcttcgccacggcgaaa
ggcagcgtgcgccgcaacagcatggatgccttcgccaacattccatcgaacggcaaacta
gcgatgcggttcgaggacgacagcgccgaccggctgatcggcgtcgccttgctcggttca
ggcgacgatgtgctgcttgcaagccgcaacggcaaggccatccgtttcgccgccgatgaa
gtgcgcgaattcaccagtcgcacatccaccggcgtacgcgggatgacgctgaaggacggt
gacgaggttgtttcgctgtcgatcctccatcgcgtcggcacgaaaccagaagaacgtgac
gactacctccgtttcgccccatggaaagcggagaaggaaggccagcccgaaatggacgag
gcgcgcttcaccgaactggtggagaaggaacagttcattctcactatctgcgccaacggg
tacggcaagctcagttccgcttacgaataccgccgtaccggccgtggcggccagggtatc
accaatatcgacaacatccgccgcaacgggccggtggtggcgagcttcagcgcaacgcag
gccaaccagttgatgctggtcaccgatcaggccaagctgattcgcatcgggctggattcg
ctgcgtgtcatcggtcgtgccagcgccggtgtccggctgttcgatgtggccgacaacgaa
cacgtggtgagcgccgtgcgcatcgacgagccggaagaggccgaggtgttggaagatgcc
gtcgaagcaggctcatctgtcgaaacggatagtaccgacacgcccggtggcgccgatagc
gatgaggccgtttaa
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