KEGG   Caenibius sp. WL: K5X80_10140
Entry
K5X80_10140       CDS       T08345                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
caen  Caenibius sp. WL
Pathway
caen02020  Two-component system
Brite
KEGG Orthology (KO) [BR:caen00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    K5X80_10140
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:caen02022]
    K5X80_10140
Two-component system [BR:caen02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   K5X80_10140
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA_16 Mg_chelatase AAA_22 DUF7059 MCM FleQ nSTAND3
Other DBs
NCBI-ProteinID: QZP07069
LinkDB
Position
2141646..2143019
AA seq 457 aa
MALDILIVDDERDIRELVAGVLGDEGYECRTAGDSTSALTAIDERRPSLVLLDVWLHGSP
MDGLEVLDAIKVREPELPVIIFSGHGNIDTAVSAVSRGAVDFIEKPFETERLLLLVERAT
ETERLRRENARLREGFLTAEEFTGNSSSINHVRATLKRVANTGSRVLISGPAGAGKEVAA
RLLHSWSPRADKAFVTVNSARITPERFEQELFGEEADGKLIRAGLLEMADGGTLYLDEVA
DMPLSTQARILRVLTDQSFVRVGGNREIGVDVRVVSSTSGDLETAIDEKRFREDLFYRLN
VVPVIIPPLVQRREDIPALSNHFFARYASEQGIAPPRIGDEAMAALQAYDWPGNVRQLRN
VVERTVILAPRERLEQIDIDLLPPEITGRGDDSDAGVGTLMGVPLREARESFEREYLRVQ
IRRFSGNISKTAAFIGMERSALHRKLKLLGLSDHRED
NT seq 1374 nt   +upstreamnt  +downstreamnt
atggcgctcgacattttgatcgtcgatgatgaacgcgacattcgcgaactcgtcgcaggc
gtgctgggcgatgaagggtacgaatgccgtacggccggagacagcacctcagcgctgacc
gccatcgacgaacgccggccgagcctggtgctgctcgacgtgtggctgcacggcagcccg
atggatgggctggaagttctcgatgcgatcaaggtgcgcgaaccggaactgccggtgatc
atcttttccggccatggcaatatcgacacggcggtatcggcggtcagccgcggggcggtg
gactttatcgagaaaccgttcgaaaccgaacgtctgttgctgctggtcgaacgcgccacg
gaaaccgaacgcttgcggcgtgagaacgcgcggctgcgcgaagggtttttgacggctgag
gaattcaccggaaacagcagttccatcaatcatgtccgtgcgacactgaaacgcgttgcc
aacaccggaagccgtgtgctcatcagcggtccggcaggggctggtaaagaagtggccgcc
cgtctgctgcacagttggagtccgcgagcggacaaggctttcgtgacagtcaattcggcg
aggatcacgcctgaacgattcgagcaggaactctttggcgaagaggcagacgggaaactt
atcagggccggactgctcgaaatggccgatggcgggacgctttatctcgatgaagtggcg
gatatgcccttgtcgacgcaggcgcggatcttgcgcgtgctgaccgatcagagcttcgtt
cgggtgggcggcaaccgtgaaatcggtgtggatgtcagagtggtttcctccacctcgggc
gatcttgaaactgccatcgacgagaagcgttttcgcgaagacctgttctatcgcctgaat
gtcgtgccggtgatcattccgccgctggtgcagcggcgtgaggatattcctgcgctctcc
aaccatttctttgcccgttacgccagcgagcagggcatcgccccgccgcgtatcggcgac
gaggcaatggctgcgctgcaagcgtatgattggccgggcaacgtgcgccagttgcgcaat
gtggtggaacgcactgttattctggccccgcgcgaaaggctggaacagattgacatcgat
ctactgccgcccgaaatcaccggccgcggcgacgacagcgatgccggtgtgggcactctg
atgggggttcccttgagagaggctcgggaaagcttcgagcgcgaatacctgcgcgtccag
attcgccggttttcagggaatatctcgaaaacagcggcttttatcggaatggagcggtcc
gccttgcatcgcaaactgaagctcttgggattgtcggatcaccgcgaggattga

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