Caenibius sp. WL: K5X80_11310
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Entry
K5X80_11310 CDS
T08345
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
caen
Caenibius sp. WL
Brite
KEGG Orthology (KO) [BR:
caen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caen03400
]
K5X80_11310 (addB)
Enzymes [BR:
caen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K5X80_11310 (addB)
DNA repair and recombination proteins [BR:
caen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
K5X80_11310 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QZP07276
LinkDB
All DBs
Position
complement(2378374..2381376)
Genome browser
AA seq
1000 aa
AA seq
DB search
MAERSGPSVYSIAAHRGFADALVAGLLPRYWEDDVGLARLTLLLPSQRAARTVSEAFIRL
AGEVGQAGLLMPRMAVVGDLDLDETLGPLLDPLGAGEAIPPAADPTARWLRVAQLIVEDA
GDAAPRGAALLRQAEQVCRTMDRLLVEDVGPEQLLQEPVIGIVGDLAAHWADSTRLFLKV
QHRWLAELEERGELDAAARRNRLFDYAAARWAEKPPGTPIVAAGVTSAAPALARLLRVVA
QTPRGAVILPDFDLSLDEAVWEELGCAGAPQEPGGPPFGAADAATHPQYHLKLLLNRMGI
ARSEVRPWHRAGMTAAPPARSHALSSLFLPPRASAGWAALPPESRQLAGVRLMETANPEE
EAQAIALLIREAIETPERRVALVTPDRGLAGRVAAHLRRWNIEADDTAGRALSQTPAGRV
ILLLAEVMAERAAPVPLCALLGHPLVAAGEGRAQWLDYARALELRLRGPRPAPGLAPLQH
HIAHLARHDAAITQWWGKVEAALAPLMIAQGAEPAPLAEQIDLLAAAGEALCGIGLWSRE
DGRALSALIEDLRSHAARIGTVLEPLAVPALLRDMMDKVAVRPPYGGHPRVAIYGLLESR
MSRADLVICGGLNEGSWPQPPGPDPLLPPAILRALGVPGADFRIGLAAHDLAGALGAPEV
VLSRAQRDGQGPAIPSRFLLRVRALLGEDLLHAHQETHAVELARMLDAAEPAPAYQRPEP
CPSAEQRDVPLAVTALDRLRGDPYQFYASAILRLRSLDPLDAEPSPAWQGTVAHWILQIW
HQEGGELRPIAERVLDEENAHPLMRGLWRPRLLAALDWIEAEIARLPDRTIVAVEQDGEM
IVDGVRIHGRADRIDRFANGELAIVDYKTGGPPSAAMVEKGFALQLGLIGLMAQAGGIAG
ASGEPTHFEYWSFGKDRKSETGFGYRIERVAEGRKKGLKREEYLAESSHFLREAIQRWIK
GGEPFTARLNPDFPGYADYDQLMRLDEWQARADETGDTVA
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
gtggctgagcgttccgggcccagcgtctattcgatcgctgcccatcgcgggttcgccgat
gccctggtggccgggcttctgccgcgctactgggaggatgacgtcggccttgcccggctg
acgctgctgctgccgagccagcgcgccgcccgcacggtgagcgaggcttttatccgcctc
gccggagaagtggggcaagctggcctgctgatgccgcgcatggcggtggtgggtgatctc
gatctggatgaaacgctggggccgctgctcgatccgctgggcgcgggcgaggcgatcccg
ccagctgccgatcccaccgcccgctggctgcgggtggcgcagttgattgtcgaagatgcg
ggggatgccgcgccgcgcggcgccgccttgctgcggcaggcggaacaggtgtgccgcacg
atggaccgcctgctggtggaagacgtcgggcccgagcaactgttgcaggagccggtgatc
ggtattgtcggcgatctggcggcgcactgggcggattcgacccggctgttcctcaaggtc
cagcatcgctggctggccgaactggaggagcgcggcgaactggatgccgccgcgcggcgc
aatcggctgttcgattatgcggcggcccgctgggcggaaaagccaccggggaccccgatc
gtcgccgcaggcgtgaccagcgccgcgcccgcgctggcgcggttgttgcgggtggtggcg
cagacaccgcgcggggcggtgattctgccggacttcgatctttcgctggatgaggcggtg
tgggaagaactgggctgcgcgggggcgccgcaagagccgggcgggccgcccttcggcgcg
gccgatgccgccacccatccgcaatatcatctcaagctgctgctcaaccgcatgggaatt
gcgcggagcgaagtgcgcccctggcaccgcgcgggcatgacagcggccccaccggcgcgc
agccacgcgctttccagcctgttcctgccgcccagggcaagcgcggggtgggcggcctta
cccccggagagccgccagcttgccggtgtgcggctgatggaaaccgccaatcccgaggaa
gaagcgcaggccatcgccctgttgattcgcgaggcgatcgaaacgcccgagcggcgtgtc
gcactggtaacgccggatcgcgggcttgctgggcgcgtcgccgcgcatctgcgccgctgg
aatatcgaagcggatgacacggccgggcgggctctttcgcaaacaccggcaggccgcgtg
attctgcttctggccgaagtcatggccgaacgtgcggcgcccgttccgctatgcgctctg
ctggggcatccactggttgccgccggggaagggcgggcgcaatggctggactatgcccgc
gcgctggaattgcgcctgcgtggcccgcgccccgcgcccggcctcgcgccgctacagcac
catatcgcgcatctggcgcgccatgatgcagcgatcacgcaatggtggggcaaggttgag
gccgcgctggccccgctgatgatcgcgcaaggcgcagagcccgcaccgcttgccgagcag
atcgatctgctcgccgctgcgggcgaggcgctgtgcggcataggattgtggagccgggag
gacgggcgtgccctttccgcgctgatcgaggatctgcgttcgcacgctgcccggatcggc
accgtgctggagccgctggcagtccccgccttgttgcgcgatatgatggacaaggtggcc
gtgcggccgccctatggcgggcatccgcgcgtggcgatctacggtttgctcgaatcgcgg
atgagccgggccgatctggtgatctgcggcgggctgaacgaaggcagttggcctcagcca
ccgggccccgatcctcttctgccgcccgccattctgcgtgctctgggcgtgccgggcgcg
gatttccgtatcggcctggccgcgcacgatctggcgggcgcgctgggcgcgcccgaagtg
gtgctgagccgggcccagcgcgatgggcaggggccggcgatcccttcgcgcttccttctg
cgcgtgcgcgccttgctgggcgaagacctgttgcacgcgcatcaggaaacgcacgcagtc
gaactggcgagaatgctggacgctgccgagcctgcacccgcttaccaacggccggagccg
tgccccagcgccgagcagcgcgatgtccccctggcggtgacggcgctcgaccgtctgcgg
ggcgatccctaccaattctatgccagcgcgatcctgcggctgcgtagtctcgatccgctg
gacgcggagccgtctcctgcatggcagggcacggttgcccactggattttgcagatatgg
catcaggaaggcggcgaactgcgcccgatcgcggagcgcgtgctggatgaggaaaacgcg
catccgctgatgcgtgggctctggcggccccggctgcttgccgcgctggactggatcgaa
gccgaaatcgcccgcctgcccgatcgcacgattgtcgcggtcgaacaggatggcgagatg
atcgtcgacggcgtgcgcattcatggccgggcggaccggatcgatcgcttcgccaatggc
gaactggccatcgtcgattacaagaccggcggcccgccgtctgcggctatggtcgagaaa
ggcttcgctctgcaactcggcctgatcgggttgatggcgcaggcgggcggcatcgcgggg
gcttcaggagagccgacccatttcgaatactggtcgttcggaaaggaccgcaagagcgaa
accggctttggctatcgcattgaacgcgtggcagaaggtaggaagaagggattgaaaagg
gaggaatatcttgcggagagctcgcatttcctccgcgaagccatccaacgctggatcaag
ggcggtgaaccgttcaccgccaggctcaatcccgattttcccggttatgcggattacgat
cagttgatgcgtctcgatgaatggcaggcgcgtgccgatgaaaccggggatacggtggca
tga
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