Caenibius sp. WL: K5X80_11635
Help
Entry
K5X80_11635 CDS
T08345
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
caen
Caenibius sp. WL
Pathway
caen00300
Lysine biosynthesis
caen00470
D-Amino acid metabolism
caen01100
Metabolic pathways
caen01110
Biosynthesis of secondary metabolites
caen01120
Microbial metabolism in diverse environments
caen01230
Biosynthesis of amino acids
Module
caen_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
caen00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
K5X80_11635 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K5X80_11635 (dapF)
Enzymes [BR:
caen01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
K5X80_11635 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
QZP07330
LinkDB
All DBs
Position
2447903..2448727
Genome browser
AA seq
274 aa
AA seq
DB search
MRVPFIKMHGLGNDFIVLDSRGDTLPPVDARVAAALADRKTGIGCDQLVLIEPSTIADLR
MRIFNPDGSEVGACGNASRAVALLQGQPCTIETGGGLIEARPADAGIAVNMGAPRFGWDE
LPLAYAMDTLAMPVGWEELESPVAVNVGNPHVVFFVPDCDAVELDRLGPLIENDPLFPER
VNVNVATVTGPQSLRLRVWERGAGLTRACGTGACATAIAAMRRGLTGRSVEVTLPGGPLR
IDWDDDDAIIMTGPAVESFRGDFAWEYYAGDSRA
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtccctttcatcaagatgcacggtctgggcaacgatttcatcgtgctcgacagc
cgcggcgacactcttccgcccgtcgatgcgcgggtggccgcggcgcttgccgaccgtaag
accgggatcggctgcgatcagctcgttctgatcgaacccagcaccatcgccgatcttcgg
atgcgcattttcaatcccgatggcagcgaagtcggcgcctgcggcaacgccagccgggcc
gttgccctgttgcagggacagccctgcacgatcgaaaccggcggcggactgatcgaagcc
cgccccgccgatgcgggcattgccgtcaacatgggcgctccgcgtttcgggtgggacgaa
ctgccgctggcctacgcgatggatacgctggccatgccggtgggctgggaagaactggaa
agcccggttgcggtaaatgtcggcaatccgcatgtcgtgttcttcgtgcccgattgtgac
gcggtcgaactcgatcgcctgggcccgctgatcgaaaacgatccgctgtttcccgaacgg
gtgaatgtgaatgtggccacggtgacagggccgcaatcgctgcgcctgcgcgtgtgggag
cgcggggccgggctgacgcgggcctgcggcaccggcgcctgcgcaacggccatcgcggcc
atgcggcgcgggttgaccgggcgcagcgtcgaagtgactttgcctggcggccccctcagg
atcgactgggacgatgacgacgcgatcatcatgaccgggcccgccgtcgaatccttccgc
ggggatttcgcatgggagtattacgcgggggacagccgcgcatga
DBGET
integrated database retrieval system