Caenibius sp. WL: K5X80_11810
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Entry
K5X80_11810 CDS
T08345
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
caen
Caenibius sp. WL
Brite
KEGG Orthology (KO) [BR:
caen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caen03032
]
K5X80_11810
03036 Chromosome and associated proteins [BR:
caen03036
]
K5X80_11810
03400 DNA repair and recombination proteins [BR:
caen03400
]
K5X80_11810
DNA replication proteins [BR:
caen03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K5X80_11810
Chromosome and associated proteins [BR:
caen03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
K5X80_11810
DNA repair and recombination proteins [BR:
caen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
K5X80_11810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
VWA_3
DUF2267
Motif
Other DBs
NCBI-ProteinID:
QZP07360
LinkDB
All DBs
Position
complement(2477934..2478206)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKNDLISAVADSSGLSRSDATKAVEGVFDAITAALAKGDEVRLVGFGTFATAKRKASTG
RNPRTGEAMTIKASTQPKFKAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaacgatctgatcagcgctgttgcagattcgagcggcctttcccgcagtgac
gcgaccaaggctgtcgaaggtgtgttcgatgcgatcaccgcagcgctggcaaagggcgac
gaagtgcgcctcgtcggcttcggcacgttcgcgaccgccaagcgcaaggcttccaccggc
cgtaacccgcgcaccggcgaagcgatgaccatcaaggcttccacgcagccgaagttcaag
gctggcaagggcctgaaggacgcggtcaactaa
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