Caenibius sp. WL: K5X80_12640
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Entry
K5X80_12640 CDS
T08345
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
caen
Caenibius sp. WL
Brite
KEGG Orthology (KO) [BR:
caen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caen03032
]
K5X80_12640
03400 DNA repair and recombination proteins [BR:
caen03400
]
K5X80_12640
Enzymes [BR:
caen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K5X80_12640
DNA replication proteins [BR:
caen03032
]
Prokaryotic type
DNA Topoisomerases
K5X80_12640
DNA repair and recombination proteins [BR:
caen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K5X80_12640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QZP07507
LinkDB
All DBs
Position
2645521..2646486
Genome browser
AA seq
321 aa
AA seq
DB search
MHYVHADQPGISRKALKRGWAYYDEHGHRITDREEIDRLNAIALPPAYSDAWFSPSPDAH
LLATGRDARGRKQYRYHPRFRSRKERQKYANCLCFGQALPALRKRVAKDLRQRKLTMERA
VAALVRLLDCGHIRVGNEHYAKSNGSYGACTLLMRHVDHRGTGLRIRYRGKGGKEQELEI
DDRSLARFVRDMQDLPGQRLFQFLDSDGNLQTVGSTDVNDYIRAAMGDAFTAKDFRTWGA
SVAAFEALVETDGELSPQAMAEIVAGRLGNTPIIARKSYIHPKLLEFAGKPPTASRKRRL
KLLRGTRWLSPAERGLLKFLS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcactatgtccatgcggatcagcccggcatttcccgcaaggccttgaagcggggatgg
gcctattacgacgagcatggccatcgcataaccgaccgggaagagatcgaccggcttaac
gcgattgccctgccacccgcctatagcgatgcctggttcagcccttcgccggacgcccat
ctgctggcgacaggccgcgatgcgagagggcgcaagcaataccgctaccacccccgattt
cgatcccggaaagagcgccagaagtatgccaattgcctgtgcttcggccaagccctgccc
gctttgcgcaaacgcgttgccaaggatctgcgccagcgcaaactgacgatggagcgcgca
gtcgccgcactggtccgcctgctggattgcgggcatatccgcgtcggcaacgaacactac
gcgaaaagcaacggcagctacggcgcctgcacattgctgatgcgccacgtcgatcatcgc
ggcaccggattgcggattcgctatcgcgggaaaggcggcaaggagcaggaacttgaaatc
gacgaccgcagccttgcacggttcgtgcgcgacatgcaggatttgcccggccagcgcctg
ttccagtttctcgactcggacggcaatctgcaaaccgtgggctctacggatgtgaacgac
tacatccgtgccgccatgggcgacgctttcaccgccaaggatttccgcacctggggagcg
agcgtggcagcgttcgaggcgctggtggagacggacggcgagctaagcccccaggccatg
gccgaaatcgtcgccggccgtctgggcaacaccccgatcatcgcccgcaagtcctatatt
catcccaaactgctcgaatttgccggaaagcctccaacggccagccggaagcgcagactc
aagttgctgcgcggcacacgctggctatcgcccgccgaacgcggactgttaaagttcctg
agctag
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