Caenibius sp. WL: K5X80_13150
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Entry
K5X80_13150 CDS
T08345
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
caen
Caenibius sp. WL
Pathway
caen03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
caen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K5X80_13150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caen03400
]
K5X80_13150
Enzymes [BR:
caen01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
K5X80_13150
DNA repair and recombination proteins [BR:
caen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K5X80_13150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
QZP07600
LinkDB
All DBs
Position
complement(2766204..2767631)
Genome browser
AA seq
475 aa
AA seq
DB search
MREVVLQMPGDFAEWRHAARGLLVEGVAPEDVSWRSGLEGASLFGSSAAIESTATISLPR
DLIAMAGRVICYRDAEVPARLYRLVWRALHDRQLLTRTTDPEVDWLRKADKATRRDVHKM
HAFVRFRRLGEEAGREAFAAWFEPSHRILQLAAPFFRRRFYGMDWAIITPDARAIWHEEQ
LAYGPGGTRDEVPTNDAVEDQWRTYYGAIFNPARVKISAMRAEMPKKYWRNLPEAQNIAP
LLAGAGARVERMREAAVSSANPRSEKWRTRMPADPILDHDVRTLDEIAREIRRCVRCPLY
CNATQSVPGEGPEGAQIMLVGEQPGDQEDLQGRPFVGPAGQVLSEALEEAGLERRRLFLT
NAVKHFKFEPRGKKRLHQNPTATEIDICRWWLDKERALIKPRIIVTLGASALRAVTGTGA
SIKSMRGGVHELEGGTKLIATIHPSYLLRLPDRKRVAEEREAFVTDLARARSYLV
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
gtgagagaagtcgtgcttcagatgcccggtgatttcgccgagtggcgacatgctgcgcgc
gggctgcttgtggaaggcgtagcgcccgaagatgtaagctggcgaagcggactggaaggc
gcatcgctgttcggcagcagtgcagcgatcgaatcgacggctaccatatccttgccgcgc
gacctgattgcaatggccgggcgggtaatctgctacagggatgcagaagtgccagcgcgg
ctctaccggcttgtctggcgtgcgctgcacgaccggcaattgctgacccgcactaccgat
cctgaggtcgactggctgcgaaaggcggacaaagcgacccgtcgcgatgtgcacaagatg
cacgccttcgtccgctttcgccggcttggcgaagaggcagggcgggaagcgttcgccgcg
tggttcgagccatcgcaccgcatattacagctggccgcacctttctttcgcaggcgcttc
tatgggatggattgggcgatcatcacgcccgacgcgcgcgcgatctggcacgaagagcag
cttgcttatggtcccggtggtaccagggacgaggtcccgacaaacgatgccgtcgaggat
cagtggcggacctattatggcgcgattttcaatccagcacgggtgaagatcagcgcgatg
cgtgccgagatgccgaagaaatattggcgcaatctgccagaagcacagaatatcgcacca
ttgctggcaggcgccggggcgcgggtggagcgtatgcgggaggcggctgtttcctcggca
aatccacgaagcgaaaaatggcggacgcgtatgcccgcagacccgatcctcgatcacgat
gtcagaacgctcgatgagatcgcccgcgagatccgccgctgcgtgcgctgcccgctttac
tgcaatgcgacccaaagcgtaccaggcgaaggcccggagggtgcacagatcatgctcgtt
ggtgagcaacccggcgatcaggaggatttacaaggccggccatttgtcggcccggctggg
caggtgctgagcgaggcgcttgaggaagcggggcttgaacggcggcggctgttcctcacc
aatgcggtcaagcatttcaagtttgagccgcgcgggaaaaagcgattgcaccagaatccg
acagcgactgaaatcgatatctgtcgctggtggctcgataaagagcgtgctctgataaaa
ccccgcatcatcgtgacgctcggggcaagcgctttacgcgcggtgacagggacgggtgcg
agcatcaaatcgatgcgcggaggcgtgcatgaactggaaggggggacgaagctgatcgcg
acgatccatccctcttacctgctacggcttcccgatcgcaaacgtgtggcggaggagcgc
gaggcattcgtcaccgatcttgctcgcgcgcgcagctacctggtttga
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