Caenibius sp. WL: K5X80_13945
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Entry
K5X80_13945 CDS
T08345
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
caen
Caenibius sp. WL
Brite
KEGG Orthology (KO) [BR:
caen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caen03016
]
K5X80_13945 (truB)
Enzymes [BR:
caen01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
K5X80_13945 (truB)
Transfer RNA biogenesis [BR:
caen03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K5X80_13945 (truB)
Prokaryotic type
K5X80_13945 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QZP09918
LinkDB
All DBs
Position
complement(2923164..2924150)
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AA seq
328 aa
AA seq
DB search
MPHGWIVLDKPVGLGSTQAVAAVKRNLREAGYGKKVKVGHGGTLDPLAEGVLPIAIGEAT
KLCGRMLDASKVYAFTIQFGSETDTLDAEGEVVARSEHFPSFPAIAAVLAHFTGPIEQVP
PAYSALKVDGQRAYDLARAGEDVTLKSRAVTIHAFDFAVPHGGAGEVESAFAETAGRPDP
FDPAAPLELVDAVTLVAHVSKGTYIRSLARDIAHALGTVGHVTMLRRIKAGPFTEKRAIS
LDKLNEIGRGAALEDVILPLEAGLDDIPALSLDPDTVRAVRQGRVISGLPQDDGLYWARS
GAVPVALMELSGGEARVVRGFNLSDVAE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgccgcatggctggatcgttctcgacaagccggtggggctgggctcgacgcaggccgtg
gcggcggtgaagcgcaatctgcgtgaggcgggctacggcaagaaggtcaaggtcggccac
ggcggcacgctcgatcccttggcagaaggcgtgctgcccatcgccatcggcgaagcgacc
aagctgtgcgggcggatgctcgatgcgtctaaggtctatgctttcactatccagttcggc
agcgagaccgatacgcttgatgcggaaggggaggtggtcgcccgcagcgaacatttcccc
tccttccccgccatcgcagcggtgctggcgcatttcaccggcccgatcgagcaggtgccg
cccgcctattccgcgctcaaggtcgacgggcagcgggcatacgatcttgcgcgggcgggc
gaagatgtaaccctgaaaagccgggcggtgacgatccacgcgttcgatttcgccgtgccg
catggcggggctggcgaggtggagtcggcttttgcggaaaccgcgggcaggcccgatccg
ttcgatcccgctgctccactcgaactggtcgatgccgtgacattggtggcgcatgtctcc
aaaggcacttatatccgaagcctcgcgcgggacatcgcccatgcgcttggcacggtcggc
catgtgaccatgttgcgccggatcaaagccgggccgtttaccgagaaacgggcgatttca
ctggacaaactcaacgaaatcggtagaggcgcggcccttgaagacgtaatcctgccgttg
gaggcggggctggacgacatcccggccctttctctcgatccggacacggtacgggcggtc
cgtcagggccgggtcatttccggattgccccaggatgatgggctgtattgggcaagatcg
ggcgcggtcccagttgcgctgatggagctttcgggcggtgaagcccgggtcgtcaggggg
ttcaatctttcggatgtcgcggagtga
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