Collinsella aerofaciens: CSV91_00705
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Entry
CSV91_00705 CDS
T05143
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
caer
Collinsella aerofaciens
Pathway
caer03410
Base excision repair
caer03430
Mismatch repair
caer03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CSV91_00705 (recJ)
03430 Mismatch repair
CSV91_00705 (recJ)
03440 Homologous recombination
CSV91_00705 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caer03400
]
CSV91_00705 (recJ)
DNA repair and recombination proteins [BR:
caer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CSV91_00705 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CSV91_00705 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CSV91_00705 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
Helicase_C
DEAD
DHHA1
ResIII
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
ATP53190
UniProt:
A0A2D1TV11
LinkDB
All DBs
Position
155657..158944
Genome browser
AA seq
1095 aa
AA seq
DB search
MSSLKTTHRWAVAQQNPELEKELSAGLGIPGLVARIMVAHGITSIEEGQLFLTPSLDRDW
ADPIIIPGMSVVADRVERAIRNHEHIAVFGDFDVDGITSTCLLTEALRTFGADVTPFIPH
RFDEGYGLSRAALDRVNELARPQLIVTVDNGIAAKEEVSYLESLGIDLVVTDHHEPSDQV
PQCVPLTDPKLEDEGPSRELAGAGVALKLVQVLGERLDKPSYWRSLIEVAALGTVSDMMP
LTPENRALVAEGIQQMRVTARPGYIALAALAKADLSSITADGLSFSLIPRLNAAGRMADP
KLALDLLLARDPIEASSLAAELEEINRQRREIEAELTRDAMAKVEKTYDGGRAIVVGGEG
WHEGVKGIVASRLTNRYHVPALLFSIEDGIARGSGRSVGKVNLFDAVERCSDLLIRRGGH
AGAVGVTIEASKLDEFRRRLSAVLSELPAEDFEDTDEVAATVDLSELNIETIEQISRLEP
FGQGNKVPLLAAEGVTMCDRAVVGKTGEHMRFVATDGAASVPAIMFRVPQIDKLINCDSA
VDLVFEAVAEHWQGRVKPKLMIKDVLVRDTTLPSVDDPACELRRGVQPADSGLRLESRKR
ETLAQLSYTELTRSLIHSFIGSNQPHRAQVEALDALADHQSVLAVMGTGRGKSLIFHVHA
AREAVLRGRASIFVYPLRALVADQAYHLSSTMAALGIGVGVLTGETVEAARDDVFAGLAS
GRTGIVLTTPEFLSIHRDRFARSGRIGFVVIDEAHHAGLAKGGDRSAYLDMPDIFKALGD
PVVMAATATATAPVVAELARMLPITRTVVDETVRENLQLEDDRDLASRENRLVSIVATGE
KTVIYVNSRDQSVALAKTLRKRVPDCATHIAFYNAGLARSDRRRVEEAFRDGSLSCIVST
SAFGEGVNLPDIRHVVLYHMPFGAIEFNQMSGRAGRDGQPAVIHLLYSSRDARINERLLD
CYAPERDELVTLYRALQTMWRSNRGKTGDDSFSASDIDIAQMCLAIDARTPVDERSVESG
LGIFEELGFCRVSGFDDTRRIAMAENPGRVQLSRSIRYLEGLRSRMEFSAFRSWALDSCA
SDMLAKVNRPIVPRA
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgcttaagacgacgcatcgctgggcggtcgctcagcaaaaccccgaactcgaa
aaggagctttcggctggcctgggaatacccgggctggtggcgcgcattatggttgcgcac
ggcattacatccatcgaagagggccagctgtttttgacgccttcgctcgatcgcgactgg
gccgacccaatcattatcccgggcatgtcggtcgttgccgaccgcgtcgagcgtgctatt
cgcaaccacgagcacatcgcggtctttggcgattttgacgttgacggtattacgtcgacc
tgcctgttaaccgaggcgctgcgcacgtttggcgccgatgtcacgccgtttattccgcat
cgctttgacgagggctacggtctctcgcgcgcggcgctcgaccgcgttaacgagctcgct
cgcccccagttgatcgtgaccgtcgataacggcattgccgccaaggaagaggtctcctat
ctggagagcctgggaatcgatctggtggttacggaccaccatgagccgtccgaccaggtg
ccgcagtgcgtgcccctgaccgaccccaagctcgaggatgaggggccctcgcgtgaactt
gccggtgctggtgtggcgctcaagctggtgcaagtcctgggtgagcgcttggacaagccg
tcgtattggcgttcgctaatcgaggtcgcggcgctgggcaccgtgtccgacatgatgccg
ctcacgcccgagaaccgcgcgctggttgccgagggcatccagcagatgcgcgtaaccgct
cgccccggctatatcgcgcttgccgcgctcgccaaggcagacctttcgagcattacggcg
gatggcctatcgttctcgctcattccccgcttaaacgctgccggtcgcatggccgatccc
aagctggcgctcgacctgctgcttgcccgcgatcccatcgaagcaagctcgctggcggcc
gagctcgaggaaatcaaccgccagcgccgtgagatcgaggcggagctcacgcgcgatgcc
atggcaaaggtcgagaagacctatgacggcggacgcgcgatcgttgtgggcggcgaaggc
tggcacgagggcgtcaagggcatcgtggcaagccgtctgaccaaccgctatcacgtgccg
gcgctgctgttctcgatcgaggacggtatcgcgcgcggctctggtcgctcggtgggcaaa
gttaacctgtttgacgccgtcgagcgctgttccgacctgctgattcgtcgcggcggacat
gccggtgcggtgggtgtgaccatcgaggcatccaagctcgatgagttccgccgccgcctt
tccgccgtgctgtccgagcttcccgccgaggactttgaagacactgacgaggtcgccgcc
accgtcgacctttccgagctgaatatcgagaccatcgagcagatctcccgccttgagccg
tttggccagggcaacaaggtgccgctgctggctgccgagggcgtgacgatgtgcgaccgc
gccgtggtgggcaaaaccggcgagcacatgcgctttgtggcgaccgatggcgccgcgagt
gtgccggccattatgttccgcgtgccgcaaatcgataagctcatcaactgcgatagcgct
gtcgacttggtgttcgaggccgttgccgagcattggcaggggcgtgtgaagcccaagctc
atgatcaaggatgttctggtccgcgataccactctgcctagcgtcgacgatccggcatgt
gaacttcgccgcggcgtgcaaccggcggattccggtctgcgcctggagtcgcgtaagcgc
gagacgctcgcccagctttcctataccgagctcacgcgctcgcttatccatagctttatc
ggctcgaaccagccgcaccgcgcgcaggtcgaggcactcgatgccctggccgatcaccaa
agtgttctggccgttatgggaacggggcgcggcaagtcgctcatcttccatgtgcatgct
gcgcgcgaggcggtccttcgcgggcgtgcgagcatctttgtctatccgctgcgcgcgctc
gttgccgaccaggcctatcacctctcgtcgacgatggcagcgcttggcattggcgttggc
gtgctgaccggcgagaccgtggaggccgcacgcgatgacgtgttcgccggtctagcttcg
ggccgtaccggtatcgtgctcacgacgcccgagttcctgtctatccaccgtgaccgtttc
gcgcgttcgggccgcatcggctttgtcgttatcgatgaggcgcaccacgccggccttgcc
aagggcggcgaccgtagcgcctatcttgacatgcccgatatcttcaaagccctgggcgac
ccggtcgttatggctgcgacggccaccgcgacggctccggtcgtggccgagcttgcccgc
atgttgccgatcactcgcacggtggtcgacgagacggtgcgcgagaacctgcagctcgag
gacgaccgcgaccttgcgagccgcgagaaccgtttggtgtcgatcgtggcgacgggggag
aagaccgtcatttacgtcaattcgcgcgaccagtctgtggcgctcgccaagacgttgcgc
aagcgtgtgcccgattgcgcaacccatatcgcgttctataacgcggggcttgcgcgttcc
gatcgccgtcgcgtggaggaagcattccgagacggaagcctcagctgcatcgtttcgacc
tccgcctttggcgagggtgtcaacctgcccgatatccgccatgtcgtgctctaccacatg
ccgtttggcgccatcgagttcaaccagatgagcggacgtgccggccgcgatggccagccc
gccgtgatccatctgctctattcgtcgcgcgacgcccgcattaacgagcgcctgctcgac
tgctatgcgcccgagcgcgacgagctcgtcacgctctatcgcgcgctgcagaccatgtgg
cgctccaaccgcggcaaaaccggggacgattcctttagcgcgagcgatatcgacatcgcg
cagatgtgccttgccatcgatgctcgcacgccggtcgacgagcgttcggtggaaagcggc
ctgggaatcttcgaagagcttggtttctgtcgagtttcggggtttgacgacactcgtcgc
atcgcgatggccgaaaaccccggccgcgtgcaattgagcaggtcaattcgctatttggag
ggcttgcgctcgcgcatggagttttcggctttccggagctgggcgctcgattcgtgcgct
tctgatatgctagccaaagttaaccgcccgatcgtaccgcgggcctag
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