Collinsella aerofaciens: CSV91_01385
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Entry
CSV91_01385 CDS
T05143
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
caer
Collinsella aerofaciens
Pathway
caer03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
caer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CSV91_01385 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caer03400
]
CSV91_01385 (xseA)
Enzymes [BR:
caer01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CSV91_01385 (xseA)
DNA repair and recombination proteins [BR:
caer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CSV91_01385 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ATP54846
UniProt:
A0A2D1TZS8
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All DBs
Position
303207..304577
Genome browser
AA seq
456 aa
AA seq
DB search
MSQAVEIAAGALDAIPQLSVLGEVTGFRGPNARSGHCYFQIKDDSAAVDCIIWKGAYLKR
TFDLRDGMQVSFKGSFNLYKPTGRMSFVARSFSLAGEGLLRQQVAQLAEKLRREGLMDEA
RKRRIPVFCSRVAVVTSLSGAVIDDVKRTLRRRNPLVELVCVGAKVQGEGAPAELIEGLR
RAAAITPAPDCILLVRGGGSFEDLMTFNDEELARAVAACPVPVVTGIGHEPDTSICDMVS
DRRASTPTAAAESVAPAMTELADVLEARHQRLGAAMASMIGSAQVDLEMLDQRGRRAWDT
YTARLGDALDAAACRPCLNDPTFMVERRESELALTADRLSGAIARSVETFRSNFERLPER
LVASTSGLDGKRHALTLASSRLEHQGRTMLNKPASDLGRAAASLDALSPLKVLARGYSIA
YSDDGVATSAKTFKPGDAIRVRMADGNVAATVDTVE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gtgagccaggcggtagagattgccgccggcgcgcttgatgccattccgcagctgagcgtt
ttgggtgaggtcacgggtttccgcggccccaatgcccgaagcggccactgctactttcag
atcaaggacgactcggcggccgtcgactgcatcatctggaagggcgcctaccttaagcgc
accttcgacttgcgcgacggcatgcaggtgagctttaagggcagcttcaatctctacaag
cccacgggccgcatgagcttcgtcgcccgctcgttttcgctggcgggggagggcctgctg
cgtcagcaggtggctcagttggccgaaaagctgcgtcgcgagggtctgatggacgaggca
cgcaaacgtcgcatcccggtgttttgctcgcgtgtggcggtcgtcacctcgctttcgggc
gccgtaatcgacgacgtcaaacgcacattgcgtcgtcgcaacccgctcgtcgagctcgtc
tgcgtgggcgccaaggtgcaaggcgagggcgcgccggcggagcttattgaaggcttgcgc
cgcgccgctgccattacgccggcgcccgactgtattttgctggtgcgcggcggcggctcc
tttgaggacctcatgacctttaatgacgaggagcttgcccgcgcggtggcggcttgtcct
gtgcccgtggtgaccggcattggccatgagcccgatacctcgatttgcgacatggtgagc
gaccgccgcgcttccacgcccacggcggcggcagaatcggtggcgccggccatgacggag
ctggcagatgtgctcgaggcgcgccatcagcgtctgggtgccgcgatggcatcgatgatt
gggtcggcccaggtcgacttggagatgctcgatcagcgcggtcgccgtgcctgggatacc
tatacggctcgcttgggcgatgcactcgatgccgccgcatgccgcccgtgcctcaacgac
cccacatttatggttgagcgtcgcgaatcggagcttgcgctgactgccgatcgcctgtcg
ggcgccatagcacgctcggtcgagacattccgctccaactttgagcgcctgcccgagcgg
ctggttgcaagcacctcggggctcgatggcaagcgccatgcgctcacgcttgcgagttcc
cgtctggagcatcaggggcgcacgatgctcaacaaacccgcgtctgacctgggccgtgcg
gcagcctcgctcgatgccctgtcgccgctcaaggtgcttgctcgcggctattccatcgcg
tacagcgatgatggtgtggctacgagtgccaagacctttaagcctggcgacgccattcgc
gtgcgcatggcagacggcaacgtggcggcaacggtcgatacggtcgagtag
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