Collinsella aerofaciens: CSV91_01685
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Entry
CSV91_01685 CDS
T05143
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
caer
Collinsella aerofaciens
Pathway
caer03030
DNA replication
caer03410
Base excision repair
caer03420
Nucleotide excision repair
caer03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CSV91_01685
03410 Base excision repair
CSV91_01685
03420 Nucleotide excision repair
CSV91_01685
03440 Homologous recombination
CSV91_01685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caer03032
]
CSV91_01685
03400 DNA repair and recombination proteins [BR:
caer03400
]
CSV91_01685
Enzymes [BR:
caer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CSV91_01685
DNA replication proteins [BR:
caer03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CSV91_01685
DNA repair and recombination proteins [BR:
caer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CSV91_01685
NER (nucleotide excision repair)
GGR (global genome repair) factors
CSV91_01685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
ATP53363
UniProt:
A0A2D1TVG4
LinkDB
All DBs
Position
370732..373482
Genome browser
AA seq
916 aa
AA seq
DB search
MSDKRRTFAVIDGNSLMHRAFHAVPPTMNAPDGRPTNAIFGFLNMFLKMIDAFNPDGVVV
AFDKGKPRVRMEMLPQYKAQRPPMDPDLHAQFPMIKELLGALNVPILQSEGWEGDDILGT
MARLGEEAGCDMLLVTGDRDMYQLVTEHVNVVSTRKGLSDVAIMTPESVDDLYHGITPAL
VPDFYGLKGDTSDNIPGVPGIGPKKASALIAQYGSLDEVIAHADEVKGKMGENLRAHIDD
ALLSRKVATIRTDAPVELDFEATSFPAFSADEVSAALGTLGITAMQNRFLALIGDEGGAA
AAASTFEMPTIERTAAGDAEALAAVASEVARAIEAGEWVAAVVDDDKEEGALFGLTRTLW
LATSKGLFALEEADGGTPAAVEGFNFVHGVIAGVLARLFMEGRVASPDMKALLHELSPID
SSEPELMDPLSVDSTRIFDTVVAAYLLDSDRSEFDEAYLADTYLQMALPAARGAEGAGEN
APVPAARTAALTLALVAPLRECMARENAANVFDGIEMPLVPVLAKMERAGMLVDPDRLRS
LSEGLATQITEVERSIRDLAGDETFNIGSPMQLSHVLFDVMGLPTKGLKKTKRGYYSTNA
KVLSDLARDHEIVRLILDWREKSKIKSTYLDTLGPLRRGDGRVHTTYNQTITATGRLSSS
DPNLQNIPTRSELGRTVKTAFSAGEGSVFLAVDYSQIELRLLAHLSGDEHLVRAFNEGED
FHAETAARVFGVPVSEVTPDLRSRAKAVNFGIVYGQQAYGLSQSLHISMAEARDMIDRYY
EAYPGVRTFLDNVVARAKQTGYAETMYGRRRHIPELKAKNPQLRGFGERTAMNHPMQGTA
ADIIKIAMARVSRRLEEEGFAAHMILQVHDELDFECPVDEVERLTAMVRDVMEHVVDLRV
PLIAEASTGITWADAK
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaagcgccgcacctttgccgttatcgacggcaactcgctcatgcaccgtgcc
ttccacgccgtgccgccgaccatgaacgcgccggacggtcgccccaccaacgcgatcttt
ggttttctgaacatgttcctcaagatgatcgatgcctttaaccccgacggtgtggtcgtg
gcgtttgataaaggcaagccgcgcgtgcgcatggagatgctgccgcagtataaggcgcag
cgcccgcccatggaccccgatttgcacgcgcagtttccgatgatcaaggagctgctcggt
gcgctcaatgtgccgattctgcagtctgagggctgggaaggcgacgatatcctgggaacc
atggcgcgcctgggtgaggaggccggctgcgacatgctgctggtgaccggcgaccgcgac
atgtatcagctcgtgaccgagcacgtcaacgtggtctcgacccgcaagggcctgtccgac
gtggcgatcatgacgcccgagagcgtggacgatctgtatcacggcatcacgccggcgctc
gtgcccgacttttatggtctgaagggcgacacgtcggacaacattcccggcgtaccgggt
atcggccccaaaaaagcaagcgcgctcatcgcgcagtacggcagcctggacgaagtcatc
gcgcatgccgacgaggtcaagggcaagatgggcgagaacctgcgcgcgcacatcgacgac
gcgctgctgagtcgtaaggtggcgaccatccgcaccgatgcgcccgttgagctcgatttt
gaggcgacgtccttcccggcgttttctgccgatgaggtgtccgcagcactgggtacgctt
ggtatcactgccatgcagaaccgtttcttggcactgatcggtgacgagggtggcgctgct
gccgctgctagcacgtttgagatgcctacgattgagcgcaccgctgccggcgatgccgag
gcgcttgctgccgtggcgtccgaggttgcccgtgcgatcgaggcgggcgagtgggtcgcc
gccgtggtggacgacgacaaggaagagggcgcgctctttggactgacgcgcacactgtgg
ttggcgacgtccaagggcctgttcgcgctcgaggaggccgatggcggcacgcctgccgct
gtcgagggcttcaacttcgtccacggcgtgatcgccggcgtacttgcgcgcctgtttatg
gagggccgtgtggcgagcccggatatgaaggcgctgctgcacgagctttcgcccatcgat
tcttctgagcccgagctcatggacccgttgtcagtcgattccacgcgcatcttcgatacc
gtggtggctgcctatctgctggattccgatcgttccgagttcgatgaggcatatcttgcc
gatacgtatttgcagatggcgttgcctgcggcgcgcggcgcagagggtgctggtgagaac
gctccggtgccagccgcccgtactgcggccctgacactggcgctggtcgcaccgctgcgc
gagtgcatggcccgcgagaatgccgccaacgtgttcgatggcatcgagatgccgctcgtt
ccggtacttgccaagatggagcgcgcgggcatgctcgtggatcccgatcggctgcgcagc
ctgtccgagggtctggcgacccagatcaccgaggtcgagcgcagcattcgtgacctggca
ggcgacgagacctttaacatcggcagccccatgcagctctcgcacgtgctgtttgatgtt
atggggcttccgaccaagggcctcaaaaagaccaagcgcggctactattcgaccaacgcc
aaggtgctgagcgaccttgcccgcgaccacgagatcgtgcgcctgattttggactggcgt
gagaagtccaagattaagtcgacctatctggacacgctaggtccgctgcgccgtggtgac
gggcgtgtgcacaccacgtacaaccagaccatcaccgcgacggggcgtctgtcttcgagc
gaccccaatctgcaaaacattccgacgcgctcggagctggggcgtaccgtcaagacggcg
ttctcggcgggcgagggaagcgtctttttggcggtggactactcgcagattgagttgcgt
ttgctggcgcatctttcgggagacgagcacctggtgcgcgcctttaacgagggtgaggac
tttcatgccgagacggccgcgcgcgtgtttggcgtgccggtgtccgaggtaacgcccgac
ttgcgcagtcgcgccaaggccgtgaactttggcatcgtgtatggtcagcaggcctacggc
ctgtcgcagtcgctgcatatctcgatggctgaggcacgcgacatgatcgatcgctactac
gaggcctacccgggcgtgcgcacgttcctcgacaatgtggtggcgcgagccaagcagacg
ggctatgccgagaccatgtatggccgcagacgccatattcccgagctcaaggccaaaaac
ccacagctccgcggctttggtgagcgcacggccatgaaccaccccatgcagggcaccgcc
gccgacatcatcaagatcgccatggcccgcgtaagccgccgtctggaagaagagggcttt
gccgcccacatgatcctgcaagtacacgacgaactggactttgagtgtcccgtcgacgaa
gtcgagcgcctcaccgccatggtccgcgacgtcatggaacatgtagtagacctccgcgta
ccgttgatcgccgaagccagcaccggcataacctgggccgatgcgaaatag
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