Collinsella aerofaciens: CSV91_03230
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Entry
CSV91_03230 CDS
T05143
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
caer
Collinsella aerofaciens
Brite
KEGG Orthology (KO) [BR:
caer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caer03009
]
CSV91_03230 (rimO)
Enzymes [BR:
caer01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CSV91_03230 (rimO)
Ribosome biogenesis [BR:
caer03009
]
Prokaryotic type
ribosomal protein modification factors
CSV91_03230 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ATP53632
UniProt:
A0A2D1TW93
LinkDB
All DBs
Position
complement(723299..724648)
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AA seq
449 aa
AA seq
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MDTPLGSVLYITLGCAKNEVDTDRMRSLLTAAGYEEAFDPQDADIAIVNTCSFLASATSE
SIETTLELANEVQDGVRSCPIVMCGCVPSRYGDDLPDELPEVAAFVKADEEDGIVAVIDG
VLGVEREIAAYIPQVKRTVEGAVAYVKISDGCNRFCSFCMIPYIRGRYHSRNAESIISEV
RDLVAGGVREIVLIGQDTGIWGTDFADEDVAVGSPRNLAQLLRAVAEAVRPHNVWVRVLY
LQPEGMTDELIETIRDTPEVLPYIDIPVQHCDARILKAMRRSGSRQELEDLFRDLRERIP
GIVIRSTAMVGFPTETDDEFRDLIDFMDTVGFDYTSVFAYSQEEGSLAAKMEGQVDEEVK
LERAQEAMDLAESLGFAATAAHVGERAQVIVDGIEETEDGAELIGHAWFQAPDSDGAVHL
DASEASVGDILTVEFTDSFCYELIGHVVE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggatacaccgttgggctccgtgctctacatcaccctagggtgcgctaagaacgaggtc
gacaccgaccgcatgcgttctcttttgaccgccgcaggctacgaggaggcattcgacccg
caggatgccgatatcgccatcgtcaatacatgctcgttcctcgcttccgcaacgtccgag
agcatcgagaccaccctcgagctcgccaacgaggttcaggacggcgttcgttcttgcccc
atcgtcatgtgcggctgtgtgccgtcgcgctatggcgacgacctgcctgacgagctgccc
gaggttgctgcctttgtgaaggccgacgaggaggacggcatcgtggcggtcatcgatggc
gtgctgggtgtcgagcgtgagatcgctgcctatattccgcaggtcaagcgtaccgtcgag
ggtgccgttgcctacgtcaagatttccgatggctgcaaccgcttctgcagcttctgcatg
atcccctatattcgcggtcgctatcattcgcgcaatgccgagagcattatctccgaggtg
cgcgacctggttgccggcggcgtgcgcgagatcgtgctgatcggccaggacactggtatt
tggggcaccgactttgccgacgaggatgtcgccgtgggctcgccgcgcaatctggcgcag
ctgctgcgtgccgtcgccgaggccgtgcgcccgcacaacgtctgggtccgcgtgctctat
ctgcagcccgagggcatgaccgacgagcttatcgagaccattcgtgatacgcccgaggtg
ctgccctatatcgatatccccgtgcagcactgcgacgcgcgcatcctcaaggctatgcgc
cgttccggttcgcgccaggagctcgaggacctgttccgcgatctgcgtgagcgcatcccc
ggcatcgtgatccgttccacggctatggtcggcttcccgaccgagaccgacgacgagttc
cgtgatcttatcgactttatggacaccgtcggctttgactacacgagtgtctttgcctac
tcgcaggaggagggcagcctggccgccaagatggagggtcaggtcgacgaagaggtcaag
ctcgagcgcgcccaggaggccatggacttggccgagtcgctcggttttgctgcaactgcc
gcacatgtgggcgaacgcgcccaggtgatcgtcgacggtatcgaagagaccgaggacggc
gccgagctgatcggccatgcctggttccaggcgcccgattccgatggcgcggtgcacttg
gacgccagcgaggcgtccgtgggcgatattctgaccgtcgagtttaccgatagtttctgc
tatgagcttatcggtcatgttgtggagtag
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